RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 RDH16O75452 317 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 TNFRSF21O75509 655 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 CREG1O75629 220 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 RFPL3O75679 317 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 RPLP0P05388 317 aaKnown RBP11.33□□□□□ -0.6
USF1-203ENST00000368021 ADRB1P08588 477 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 IL10P22301 178 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 SOX11P35716 441 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 CRATP43155 626 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 CCT3P49368 545 aaKnown RBP11.33□□□□□ -0.6
USF1-203ENST00000368021 RPS3AP61247 264 aaKnown RBP11.33□□□□□ -0.6
USF1-203ENST00000368021 OLR1P78380 273 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 KCNAB1Q14722 419 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 SNAP47Q5SQN1 464 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 YOD1Q5VVQ6 348 aaPredicted RBP11.33□□□□□ -0.6
USF1-203ENST00000368021 ANGPTL8Q6UXH0 198 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 ZNF574Q6ZN55 896 aaPredicted RBP11.33□□□□□ -0.6
USF1-203ENST00000368021 SATL1Q86VE3 508 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 RNF130Q86XS8 419 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 ADGRG5Q8IZF4 528 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 LRRC25Q8N386 305 aaPredicted RBP11.33□□□□□ -0.6
USF1-203ENST00000368021 C11orf65Q8NCR3 313 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 PAPD5Q8NDF8 572 aaKnown RBP11.33□□□□□ -0.6
USF1-203ENST00000368021 OR5T3Q8NGG3 340 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 OR5AK3PQ8NH89 298 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 IFI44Q8TCB0 444 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 CHPT1Q8WUD6 406 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 DCAF13Q9NV06 445 aaKnown RBP11.33□□□□□ -0.6
USF1-203ENST00000368021 OLAHQ9NV23 265 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 ACSL6Q9UKU0 697 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 A0A0A6YYC8 382 aaPredicted RBP11.32□□□□□ -0.6
USF1-203ENST00000368021 TMEM150CB9EJG8 249 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 I3L1I5 382 aaPredicted RBP11.32□□□□□ -0.6
USF1-203ENST00000368021 KPNA4O00629 521 aaPredicted RBP11.32□□□□□ -0.6
USF1-203ENST00000368021 CHST10O43529 356 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 OR2B3O76000 313 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 MED26O95402 600 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 RNH1P13489 461 aaKnown RBP11.32□□□□□ -0.6
USF1-203ENST00000368021 ETS2P15036 469 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 ACP1P24666 158 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 PPP2R1BP30154 601 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 GPC1P35052 558 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 PCGF2P35227 344 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 FEN1P39748 380 aaKnown RBP11.32□□□□□ -0.6
USF1-203ENST00000368021 GCGRP47871 477 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 AVPR1BP47901 424 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 XKP51811 444 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 CCL7P80098 99 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 SHC2P98077 582 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 KCNC4Q03721 635 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 SPDYE7PQ495Y7 208 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 COX20Q5RI15 118 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 UGT2A3Q6UWM9 527 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 CCDC116Q8IYX3 515 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 EID3Q8N140 333 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 SPERTQ8NA61 448 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 RASSF5Q8WWW0 418 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 NCLNQ969V3 563 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 FAM162AQ96A26 154 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 SPRTNQ9H040 489 aaPredicted RBP11.32□□□□□ -0.6
USF1-203ENST00000368021 SYNDIG1Q9H7V2 258 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 FANCEQ9HB96 536 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 THUMPD1Q9NXG2 353 aaKnown RBP11.32□□□□□ -0.6
USF1-203ENST00000368021 RIMS3Q9UJD0 308 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 ANAPC2Q9UJX6 822 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 CLCA2Q9UQC9 943 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 CHD8Q9HCK8 2581 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 H0YJX3 145 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 SLITRK5O94991 958 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 GPR75O95800 540 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 FHP07954 510 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 IFI6P09912 130 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 C8orf89P0DMQ9 161 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 ETFAP13804 333 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 CPMP14384 443 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 FOLR1P15328 257 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 ENDOUP21128 410 aaKnown RBP11.32□□□□□ -0.6
USF1-203ENST00000368021 S100A5P33763 92 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 ITGA1P56199 1179 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 TXNL4AP83876 142 aaKnown RBP11.32□□□□□ -0.6
USF1-203ENST00000368021 PRR5P85299 388 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 DUSP2Q05923 314 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 GPR19Q15760 415 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 ZNF630Q2M218 657 aaPredicted RBP11.32□□□□□ -0.6
USF1-203ENST00000368021 GCNT6Q5T4J0 391 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 TMPRSS9Q7Z410 1059 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 C6orf120Q7Z4R8 191 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 SLC30A8Q8IWU4 369 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 GPR135Q8IZ08 494 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 OR56A1Q8NGH5 318 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 TBC1D20Q96BZ9 403 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 ZNF501Q96CX3 271 aaPredicted RBP11.32□□□□□ -0.6
USF1-203ENST00000368021 CTRCQ99895 268 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 SCNM1Q9BWG6 230 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 CUTCQ9NTM9 273 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 NTMQ9P121 344 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 SERTAD3Q9UJW9 196 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 ATXN7L1Q9ULK2 861 aaPredicted RBP11.32□□□□□ -0.6
USF1-203ENST00000368021 AURKCQ9UQB9 309 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 MRPS33Q9Y291 106 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms