RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 GIMAP4Q9NUV9 329 aa16.48■□□□□ 0.23
TRIM11-202ENST00000366699 CRNNQ9UBG3 495 aaPredicted RBP16.48■□□□□ 0.23
TRIM11-202ENST00000366699 SNX7Q9UNH6 387 aa16.48■□□□□ 0.23
TRIM11-202ENST00000366699 YBX2Q9Y2T7 364 aaKnown RBP16.48■□□□□ 0.23
TRIM11-202ENST00000366699 CKAP5Q14008 2032 aa16.48■□□□□ 0.23
TRIM11-202ENST00000366699 A0A1W2PRQ8 180 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 K7EQS6 105 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 PRICKLE3O43900 615 aaPredicted RBP16.47■□□□□ 0.23
TRIM11-202ENST00000366699 NDUFS1P28331 727 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 FEN1P39748 380 aaKnown RBP16.47■□□□□ 0.23
TRIM11-202ENST00000366699 STXBP1P61764 594 aaKnown RBP16.47■□□□□ 0.23
TRIM11-202ENST00000366699 ALDH6A1Q02252 535 aaKnown RBP16.47■□□□□ 0.23
TRIM11-202ENST00000366699 COX10Q12887 443 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 LRRC32Q14392 662 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 PARM1Q6UWI2 310 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 TMEM184AQ6ZMB5 413 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 ACOT4Q8N9L9 421 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 OR4D11Q8NGI4 311 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 HTRA1Q92743 480 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 FAM131CQ96AQ9 280 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 OPALINQ96PE5 141 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 KLHL31Q9H511 634 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 KIR3DX1Q9H7L2 352 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 SLC6A20Q9NP91 592 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 QPCTLQ9NXS2 382 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 DNAJC27Q9NZQ0 273 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 SNX11Q9Y5W9 270 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 MN1Q10571 1320 aaPredicted RBP16.47■□□□□ 0.23
TRIM11-202ENST00000366699 LAMP2P13473 410 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 SPHARQ15513 63 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 OCLNQ16625 522 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 C9orf50Q5SZB4 431 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 RNLSQ5VYX0 342 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 ANKRD54Q6NXT1 300 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 SLC34A3Q8N130 599 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 OR56A1Q8NGH5 318 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 SCARF2Q96GP6 870 aaPredicted RBP16.47■□□□□ 0.23
TRIM11-202ENST00000366699 MND1Q9BWT6 205 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 MKRN2Q9H000 416 aaKnown RBP16.47■□□□□ 0.23
TRIM11-202ENST00000366699 BCL2L10Q9HD36 194 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 A4GNTQ9UNA3 340 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 LSM2Q9Y333 95 aaKnown RBP16.47■□□□□ 0.23
TRIM11-202ENST00000366699 PLEKHM1Q9Y4G2 1056 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 PCDHGB6Q9Y5F9 930 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 C2orf16Q68DN1 1984 aa16.47■□□□□ 0.23
TRIM11-202ENST00000366699 TRANK1O15050 2925 aa16.46■□□□□ 0.23
TRIM11-202ENST00000366699 A0A075B6Q4 140 aa16.46■□□□□ 0.23
TRIM11-202ENST00000366699 LOC110117498-PIK3R3F6TDL0 507 aa16.46■□□□□ 0.23
TRIM11-202ENST00000366699 NME6O75414 186 aaPredicted RBP16.46■□□□□ 0.23
TRIM11-202ENST00000366699 ERAL1O75616 437 aaKnown RBP16.46■□□□□ 0.23
TRIM11-202ENST00000366699 IGFBP1P08833 259 aaPredicted RBP16.46■□□□□ 0.23
TRIM11-202ENST00000366699 ALOX12P18054 663 aa16.46■□□□□ 0.23
TRIM11-202ENST00000366699 ATP5A1P25705 553 aaKnown RBP16.46■□□□□ 0.23
TRIM11-202ENST00000366699 GTF2E2P29084 291 aaKnown RBP16.46■□□□□ 0.23
TRIM11-202ENST00000366699 ADPRHP54922 357 aa16.46■□□□□ 0.23
TRIM11-202ENST00000366699 NDUFA9Q16795 377 aa16.46■□□□□ 0.23
TRIM11-202ENST00000366699 MFSD4BQ5TF39 518 aa16.46■□□□□ 0.23
TRIM11-202ENST00000366699 CD300LDQ6UXZ3 194 aa16.46■□□□□ 0.23
TRIM11-202ENST00000366699 CLIP4Q8N3C7 705 aa16.46■□□□□ 0.23
TRIM11-202ENST00000366699 MFSD9Q8NBP5 474 aa16.46■□□□□ 0.23
TRIM11-202ENST00000366699 TMEM145Q8NBT3 493 aa16.46■□□□□ 0.23
TRIM11-202ENST00000366699 FAM83FQ8NEG4 500 aaPredicted RBP16.46■□□□□ 0.23
TRIM11-202ENST00000366699 OR8K5Q8NH50 307 aa16.46■□□□□ 0.23
TRIM11-202ENST00000366699 PIK3R3Q92569 461 aa16.46■□□□□ 0.23
TRIM11-202ENST00000366699 FGF14Q92915 247 aa16.46■□□□□ 0.23
TRIM11-202ENST00000366699 FNDC11Q9BVV2 318 aa16.46■□□□□ 0.23
TRIM11-202ENST00000366699 KLHL25Q9H0H3 589 aa16.46■□□□□ 0.23
TRIM11-202ENST00000366699 HHATLQ9HCP6 504 aa16.46■□□□□ 0.23
TRIM11-202ENST00000366699 PRDM7Q9NQW5 492 aa16.46■□□□□ 0.23
TRIM11-202ENST00000366699 SCML1Q9UN30 329 aa16.46■□□□□ 0.23
TRIM11-202ENST00000366699 ASB4Q9Y574 426 aa16.46■□□□□ 0.23
TRIM11-202ENST00000366699 GPX5O75715 221 aa16.46■□□□□ 0.22
TRIM11-202ENST00000366699 DLGAP3O95886 979 aa16.46■□□□□ 0.22
TRIM11-202ENST00000366699 ENDOUP21128 410 aaKnown RBP16.46■□□□□ 0.22
TRIM11-202ENST00000366699 PSMA1P25786 263 aaKnown RBP16.46■□□□□ 0.22
TRIM11-202ENST00000366699 MPIP34949 423 aa16.46■□□□□ 0.22
TRIM11-202ENST00000366699 SOX9P48436 509 aa16.46■□□□□ 0.22
TRIM11-202ENST00000366699 DEFA1P59665 94 aa16.46■□□□□ 0.22
TRIM11-202ENST00000366699 DEFA3P59666 94 aa16.46■□□□□ 0.22
TRIM11-202ENST00000366699 PRR5P85299 388 aa16.46■□□□□ 0.22
TRIM11-202ENST00000366699 PIN1Q13526 163 aaPredicted RBP16.46■□□□□ 0.22
TRIM11-202ENST00000366699 MRM1Q6IN84 353 aaKnown RBP16.46■□□□□ 0.22
TRIM11-202ENST00000366699 SYCE2Q6PIF2 218 aa16.46■□□□□ 0.22
TRIM11-202ENST00000366699 CCDC190Q86UF4 302 aa16.46■□□□□ 0.22
TRIM11-202ENST00000366699 TCEANCQ8N8B7 351 aa16.46■□□□□ 0.22
TRIM11-202ENST00000366699 SUN3Q8TAQ9 357 aa16.46■□□□□ 0.22
TRIM11-202ENST00000366699 OR2M4Q96R27 311 aa16.46■□□□□ 0.22
TRIM11-202ENST00000366699 GABRG3Q99928 467 aa16.46■□□□□ 0.22
TRIM11-202ENST00000366699 OR6C2Q9NZP2 312 aa16.46■□□□□ 0.22
TRIM11-202ENST00000366699 DOCK9Q9BZ29 2069 aa16.45■□□□□ 0.22
TRIM11-202ENST00000366699 PRAMEF27A3QJZ7 478 aa16.45■□□□□ 0.22
TRIM11-202ENST00000366699 PPM1DO15297 605 aa16.45■□□□□ 0.22
TRIM11-202ENST00000366699 FHP07954 510 aa16.45■□□□□ 0.22
TRIM11-202ENST00000366699 HOXC4P09017 264 aaPredicted RBP16.45■□□□□ 0.22
TRIM11-202ENST00000366699 CSNK2A2P19784 350 aaPredicted RBP16.45■□□□□ 0.22
TRIM11-202ENST00000366699 CD72P21854 359 aa16.45■□□□□ 0.22
TRIM11-202ENST00000366699 MAT2AP31153 395 aaKnown RBP16.45■□□□□ 0.22
TRIM11-202ENST00000366699 PRKAG1P54619 331 aa16.45■□□□□ 0.22
TRIM11-202ENST00000366699 ZNF91Q05481 1191 aa16.45■□□□□ 0.22
TRIM11-202ENST00000366699 HYAL2Q12891 473 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms