RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 TUBGCP4Q9UGJ1 667 aa3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 LEF1Q9UJU2 399 aaPredicted RBP3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 PLEKHA6Q9Y2H5 1048 aa3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 ATG4BQ9Y4P1 393 aa3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 C5orf51A6NDU8 294 aa3.09□□□□□ -1.91
RNU4-28P-201ENST00000364739 ZFP92A6NM28 416 aa3.09□□□□□ -1.91
RNU4-28P-201ENST00000364739 CACNB4O00305 520 aaPredicted RBP3.09□□□□□ -1.91
RNU4-28P-201ENST00000364739 RANBP6O60518 1105 aaKnown RBP3.09□□□□□ -1.91
RNU4-28P-201ENST00000364739 TNNT3P45378 269 aaPredicted RBP3.09□□□□□ -1.91
RNU4-28P-201ENST00000364739 ACADSBP45954 432 aa3.09□□□□□ -1.91
RNU4-28P-201ENST00000364739 HLCSP50747 726 aa3.09□□□□□ -1.91
RNU4-28P-201ENST00000364739 ROR1Q01973 937 aa3.09□□□□□ -1.91
RNU4-28P-201ENST00000364739 EXOSC7Q15024 291 aaKnown RBP3.09□□□□□ -1.91
RNU4-28P-201ENST00000364739 CD226Q15762 336 aa3.09□□□□□ -1.91
RNU4-28P-201ENST00000364739 QRICH1Q2TAL8 776 aa3.09□□□□□ -1.91
RNU4-28P-201ENST00000364739 HKDC1Q2TB90 917 aa3.09□□□□□ -1.91
RNU4-28P-201ENST00000364739 CDC42EP5Q6NZY7 148 aa3.09□□□□□ -1.91
RNU4-28P-201ENST00000364739 TATDN1Q6P1N9 297 aa3.09□□□□□ -1.91
RNU4-28P-201ENST00000364739 TMEM270Q6UE05 265 aa3.09□□□□□ -1.91
RNU4-28P-201ENST00000364739 GDAP1Q8TB36 358 aa3.09□□□□□ -1.91
RNU4-28P-201ENST00000364739 FAF2Q96CS3 445 aa3.09□□□□□ -1.91
RNU4-28P-201ENST00000364739 RPGRIP1Q96KN7 1286 aa3.09□□□□□ -1.91
RNU4-28P-201ENST00000364739 FAM173AQ9BQD7 235 aa3.09□□□□□ -1.91
RNU4-28P-201ENST00000364739 MIEF1Q9NQG6 463 aa3.09□□□□□ -1.91
RNU4-28P-201ENST00000364739 PNPLA3Q9NST1 481 aa3.09□□□□□ -1.91
RNU4-28P-201ENST00000364739 LIPT1Q9Y234 373 aa3.09□□□□□ -1.91
RNU4-28P-201ENST00000364739 RNF115Q9Y4L5 304 aa3.09□□□□□ -1.91
RNU4-28P-201ENST00000364739 EPOPA6NHQ4 379 aa3.08□□□□□ -1.92
RNU4-28P-201ENST00000364739 G3V3Y1 287 aa3.08□□□□□ -1.92
RNU4-28P-201ENST00000364739 CYB561D2O14569 222 aa3.08□□□□□ -1.92
RNU4-28P-201ENST00000364739 ZNF263O14978 683 aa3.08□□□□□ -1.92
RNU4-28P-201ENST00000364739 SNRPCP09234 159 aaKnown RBP3.08□□□□□ -1.92
RNU4-28P-201ENST00000364739 MGMTP16455 207 aa3.08□□□□□ -1.92
RNU4-28P-201ENST00000364739 PTPN4P29074 926 aa3.08□□□□□ -1.92
RNU4-28P-201ENST00000364739 SLC12A3P55017 1021 aa3.08□□□□□ -1.92
RNU4-28P-201ENST00000364739 PRKCEQ02156 737 aa3.08□□□□□ -1.92
RNU4-28P-201ENST00000364739 SERTAD2Q14140 314 aa3.08□□□□□ -1.92
RNU4-28P-201ENST00000364739 SGCBQ16585 318 aa3.08□□□□□ -1.92
RNU4-28P-201ENST00000364739 MFSD7Q6UXD7 560 aa3.08□□□□□ -1.92
RNU4-28P-201ENST00000364739 PRSS42Q7Z5A4 293 aa3.08□□□□□ -1.92
RNU4-28P-201ENST00000364739 GPR137CQ8N3F9 429 aa3.08□□□□□ -1.92
RNU4-28P-201ENST00000364739 MAGEB18Q96M61 343 aa3.08□□□□□ -1.92
RNU4-28P-201ENST00000364739 ZNF285Q96NJ3 590 aa3.08□□□□□ -1.92
RNU4-28P-201ENST00000364739 TRIM9Q9C026 710 aa3.08□□□□□ -1.92
RNU4-28P-201ENST00000364739 ZCCHC3Q9NUD5 404 aaKnown RBP3.08□□□□□ -1.92
RNU4-28P-201ENST00000364739 SENP1Q9P0U3 644 aa3.08□□□□□ -1.92
RNU4-28P-201ENST00000364739 CIDEBQ9UHD4 219 aa3.08□□□□□ -1.92
RNU4-28P-201ENST00000364739 STX8Q9UNK0 236 aa3.08□□□□□ -1.92
RNU4-28P-201ENST00000364739 SLC9A8Q9Y2E8 581 aa3.08□□□□□ -1.92
RNU4-28P-201ENST00000364739 KLHDC2Q9Y2U9 406 aa3.08□□□□□ -1.92
RNU4-28P-201ENST00000364739 AKAP3O75969 853 aa3.07□□□□□ -1.92
RNU4-28P-201ENST00000364739 PDE5AO76074 875 aa3.07□□□□□ -1.92
RNU4-28P-201ENST00000364739 SLC2A10O95528 541 aa3.07□□□□□ -1.92
RNU4-28P-201ENST00000364739 HSP90AB1P08238 724 aaKnown RBP3.07□□□□□ -1.92
RNU4-28P-201ENST00000364739 CPN1P15169 458 aa3.07□□□□□ -1.92
RNU4-28P-201ENST00000364739 RPS8P62241 208 aaKnown RBP3.07□□□□□ -1.92
RNU4-28P-201ENST00000364739 CDKL1Q00532 357 aa3.07□□□□□ -1.92
RNU4-28P-201ENST00000364739 HERC4Q5GLZ8 1057 aaPredicted RBP3.07□□□□□ -1.92
RNU4-28P-201ENST00000364739 SLC22A10Q63ZE4 541 aa3.07□□□□□ -1.92
RNU4-28P-201ENST00000364739 DMKNQ6E0U4 476 aaPredicted RBP3.07□□□□□ -1.92
RNU4-28P-201ENST00000364739 STOX1Q6ZVD7 989 aa3.07□□□□□ -1.92
RNU4-28P-201ENST00000364739 ASRGL1Q7L266 308 aa3.07□□□□□ -1.92
RNU4-28P-201ENST00000364739 LINC01006Q8NI28 216 aa3.07□□□□□ -1.92
RNU4-28P-201ENST00000364739 CCDC26Q8TAB7 109 aa3.07□□□□□ -1.92
RNU4-28P-201ENST00000364739 RFESDQ8TAC1 157 aa3.07□□□□□ -1.92
RNU4-28P-201ENST00000364739 RDH11Q8TC12 318 aa3.07□□□□□ -1.92
RNU4-28P-201ENST00000364739 ASB8Q9H765 288 aa3.07□□□□□ -1.92
RNU4-28P-201ENST00000364739 ISG20L2Q9H9L3 353 aaKnown RBP3.07□□□□□ -1.92
RNU4-28P-201ENST00000364739 AKIRIN1Q9H9L7 192 aaPredicted RBP3.07□□□□□ -1.92
RNU4-28P-201ENST00000364739 CENPMQ9NSP4 180 aa3.07□□□□□ -1.92
RNU4-28P-201ENST00000364739 ADAM22Q9P0K1 906 aa3.07□□□□□ -1.92
RNU4-28P-201ENST00000364739 FOXA2Q9Y261 457 aaPredicted RBP3.07□□□□□ -1.92
RNU4-28P-201ENST00000364739 MTF2Q9Y483 593 aaPredicted RBP3.07□□□□□ -1.92
RNU4-28P-201ENST00000364739 EI24O14681 340 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 SYNJ2O15056 1496 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 TYROBPO43914 113 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 UGT1A6P19224 532 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 ACP1P24666 158 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 MAT2AP31153 395 aaKnown RBP3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 POU3F4P49335 361 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 COL4A4P53420 1690 aaPredicted RBP3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 RIPK4P57078 832 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 STX1BP61266 288 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 ZNF85Q03923 595 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 CKAP4Q07065 602 aaKnown RBP3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 CD47Q08722 323 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 NPRL3Q12980 569 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 SLMAPQ14BN4 828 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 CLPPQ16740 277 aaPredicted RBP3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 HAGHQ16775 308 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 AARDQ4LEZ3 155 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 SLC39A12Q504Y0 691 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 GPAT3Q53EU6 434 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 APOBEC3FQ8IUX4 373 aaKnown RBP3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 OR4F17Q8NGA8 305 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 OR13F1Q8NGS4 319 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 OR52J3Q8NH60 311 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 RAB39BQ96DA2 213 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 OR4F4Q96R69 305 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 C19orf43Q9BQ61 176 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms