RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 LTB4RQ15722 352 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 LINC00303Q3SY05 128 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 ABHD17BQ5VST6 288 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 ZCCHC12Q6PEW1 402 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 FAM111BQ6SJ93 734 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 TMEM107Q6UX40 140 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 IGFL3Q6UXB1 125 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 ZNF551Q7Z340 670 aaPredicted RBP12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 RPS19BP1Q86WX3 136 aaKnown RBP12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 DND1Q8IYX4 353 aaKnown RBP12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 TRIML2Q8N7C3 387 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 ANKS4BQ8N8V4 417 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 OR7G2Q8NG99 324 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 DNAJB8Q8NHS0 232 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 CRELD1Q96HD1 420 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 CCT8L2Q96SF2 557 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 FAM107BQ9H098 131 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 DDX18Q9NVP1 670 aaKnown RBP12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 MYOTQ9UBF9 498 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 YARS2Q9Y2Z4 477 aaKnown RBP12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 ZNF451Q9Y4E5 1061 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 CROCCQ5TZA2 2017 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 C2orf92A0A1B0GVN3 265 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 CCDC154A6NI56 674 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 A6NL46 340 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 HRKO00198 91 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 UPK1AO00322 258 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 FCHO1O14526 889 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 ACOX3O15254 700 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 EMC8O43402 210 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 CELA2AP08217 269 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 SSTR4P31391 388 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 MC3RP41968 323 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 TRPC1P48995 793 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 EMDP50402 254 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 MLF1P58340 268 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 HBA1P69905 142 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 PHC1P78364 1004 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 MRPS35P82673 323 aaKnown RBP12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 TXNL4AP83876 142 aaKnown RBP12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 KCNAB2Q13303 367 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 MFAP5Q13361 173 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 EBPQ15125 230 aaKnown RBP12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 MAPRE2Q15555 327 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 MAPKAPK3Q16644 382 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 VPS26BQ4G0F5 336 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 AGKQ53H12 422 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 ACER2Q5QJU3 275 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 GKAP1Q5VSY0 366 aaPredicted RBP12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 HLA-DQA1Q5Y7H0 255 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 FUNDC1Q8IVP5 155 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 C9orf40Q8IXQ3 194 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 GPALPP1Q8IXQ4 340 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 TAGAPQ8N103 731 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 KIF2BQ8N4N8 673 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 ZNF321PQ8N8H1 164 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 OR52R1Q8NGF1 315 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 OR56A1Q8NGH5 318 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 OR9I1Q8NGQ6 314 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 C16orf52Q8NHV5 167 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 KAT2AQ92830 837 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 WWTR1Q9GZV5 400 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 EPS8L2Q9H6S3 715 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 SAR1AQ9NR31 198 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 SIRT3Q9NTG7 399 aaPredicted RBP12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 GIN1Q9NXP7 522 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 STMN3Q9NZ72 180 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 CCDC167Q9P0B6 97 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 BCAP29Q9UHQ4 241 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 ARL2BPQ9Y2Y0 163 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 HEMK1Q9Y5R4 338 aaPredicted RBP12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 MED13Q9UHV7 2174 aa12.83□□□□□ -0.36
NSMCE1-201ENST00000361439 A0A1W2PP18 115 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 TMEM200CA6NKL6 621 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 A8MUI8 341 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 MASP2O00187 686 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 C6orf47O95873 294 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 KRT16P08779 473 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 ZCCHC18P0CG32 403 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 DRD5P21918 477 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 UQCRC2P22695 453 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 TRHRP34981 398 aaPredicted RBP12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 MAGEA8P43361 318 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 PPICP45877 212 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 CCT3P49368 545 aaKnown RBP12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 DGKQP52824 942 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 ZNHIT3Q15649 155 aaPredicted RBP12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 PIGGQ5H8A4 983 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 COQ5Q5HYK3 327 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 SIRT6Q8N6T7 355 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 ZNF441Q8N8Z8 693 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 OR4A15Q8NGL6 344 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 NUDT8Q8WV74 236 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 HAS2Q92819 552 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 HOXB13Q92826 284 aaPredicted RBP12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 ADIPOR1Q96A54 375 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 SPDL1Q96EA4 605 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 FAM120BQ96EK7 910 aaKnown RBP12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 HSPBAP1Q96EW2 488 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 ABHD17AQ96GS6 310 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms