RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 ARMC7Q9H6L4 198 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 SLC17A4Q9Y2C5 497 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 NUP210Q8TEM1 1887 aaPredicted RBP8.79□□□□□ -1
GTF3C2-202ENST00000359541 CEP250Q9BV73 2442 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 A0A1W2PRQ8 180 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 KLHL18O94889 574 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 PTHP01270 115 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 CCNYL3P0C7X3 344 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 NR2F6P10588 404 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 PORP16435 677 aaPredicted RBP8.79□□□□□ -1
GTF3C2-202ENST00000359541 BCL6P41182 706 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 MLLT10P55197 1068 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 LIM2P55344 173 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 ALDH6A1Q02252 535 aaKnown RBP8.79□□□□□ -1
GTF3C2-202ENST00000359541 PUM1Q14671 1186 aaKnown RBP eCLIP8.79□□□□□ -1
GTF3C2-202ENST00000359541 SYPL1Q16563 259 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 ABHD17CQ6PCB6 329 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 MFSD9Q8NBP5 474 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 ITPKCQ96DU7 683 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 SLIRPQ9GZT3 109 aaKnown RBP8.79□□□□□ -1
GTF3C2-202ENST00000359541 BTBD1Q9H0C5 482 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 ABCB10Q9NRK6 738 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 TVP23BQ9NYZ1 205 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 SSR3Q9UNL2 185 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 DOLKQ9UPQ8 538 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 WDR37Q9Y2I8 494 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 PCYT1BQ9Y5K3 369 aaPredicted RBP8.79□□□□□ -1
GTF3C2-202ENST00000359541 METTL15A6NJ78 407 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 MAN2B1O00754 1011 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 SLC31A1O15431 190 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 LCMT2O60294 686 aaKnown RBP8.79□□□□□ -1
GTF3C2-202ENST00000359541 SLITRK5O94991 958 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 ASGR2P07307 311 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 ATP5A1P25705 553 aaKnown RBP8.79□□□□□ -1
GTF3C2-202ENST00000359541 COPZ1P61923 177 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 OXA1LQ15070 435 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 RPE65Q16518 533 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 PRSS53Q2L4Q9 553 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 ZNF311Q5JNZ3 666 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 KIAA1211LQ6NV74 962 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 PLEKHG7Q6ZR37 379 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 AMIGO1Q86WK6 493 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 CCDC116Q8IYX3 515 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 OR5D16Q8NGK9 328 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 CREB3L4Q8TEY5 395 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 MS4A6EQ96DS6 147 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 SRMSQ9H3Y6 488 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 KIR3DX1Q9H7L2 352 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 SEC14L4Q9UDX3 406 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 MKLN1Q9UL63 735 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 GLOD5A6NK44 160 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 OR52A4PA6NMU1 304 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 LOC110117498-PIK3R3F6TDL0 507 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 M0R082 166 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 SYT5O00445 386 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 HMGN2P05204 90 aaKnown RBP8.79□□□□□ -1
GTF3C2-202ENST00000359541 GABRB1P18505 474 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 MAT2AP31153 395 aaKnown RBP8.79□□□□□ -1
GTF3C2-202ENST00000359541 ST3GAL3Q11203 375 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 SUZ12Q15022 739 aaKnown RBP8.79□□□□□ -1
GTF3C2-202ENST00000359541 SNAPC1Q16533 368 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 PPP2R2DQ66LE6 453 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 PGBD2Q6P3X8 592 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 SPRED2Q7Z698 418 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 ZNF655Q8N720 491 aaPredicted RBP8.79□□□□□ -1
GTF3C2-202ENST00000359541 TCEANCQ8N8B7 351 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 GPR32P1Q8NGA4 272 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 OR4K5Q8NGD3 323 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 PIGXQ8TBF5 258 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 PIK3R3Q92569 461 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 GAL3ST3Q96A11 431 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 ELSPBP1Q96BH3 223 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 CHFRQ96EP1 664 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 DNAJC27Q9NZQ0 273 aa8.79□□□□□ -1
GTF3C2-202ENST00000359541 PRAMEF25A6NGN4 478 aa8.78□□□□□ -1
GTF3C2-202ENST00000359541 AGAP5A6NIR3 686 aa8.78□□□□□ -1
GTF3C2-202ENST00000359541 LATO43561 262 aa8.78□□□□□ -1
GTF3C2-202ENST00000359541 ASNA1O43681 348 aa8.78□□□□□ -1
GTF3C2-202ENST00000359541 CD97P48960 835 aa8.78□□□□□ -1
GTF3C2-202ENST00000359541 RAB8AP61006 207 aa8.78□□□□□ -1
GTF3C2-202ENST00000359541 TRAM2Q15035 370 aa8.78□□□□□ -1
GTF3C2-202ENST00000359541 PUS10Q3MIT2 529 aaKnown RBP8.78□□□□□ -1
GTF3C2-202ENST00000359541 ZNF730Q6ZMV8 503 aa8.78□□□□□ -1
GTF3C2-202ENST00000359541 IQCHQ86VS3 1027 aa8.78□□□□□ -1
GTF3C2-202ENST00000359541 NUP43Q8NFH3 380 aa8.78□□□□□ -1
GTF3C2-202ENST00000359541 GNPDA2Q8TDQ7 276 aa8.78□□□□□ -1
GTF3C2-202ENST00000359541 YIPF4Q9BSR8 244 aa8.78□□□□□ -1
GTF3C2-202ENST00000359541 TSSK6Q9BXA6 273 aa8.78□□□□□ -1
GTF3C2-202ENST00000359541 EQTNQ9NQ60 294 aa8.78□□□□□ -1
GTF3C2-202ENST00000359541 M0R3H8 397 aa8.78□□□□□ -1
GTF3C2-202ENST00000359541 HAT1O14929 419 aa8.78□□□□□ -1
GTF3C2-202ENST00000359541 PLRG1O43660 514 aaKnown RBP8.78□□□□□ -1
GTF3C2-202ENST00000359541 ENTPD6O75354 484 aa8.78□□□□□ -1
GTF3C2-202ENST00000359541 AIFM1O95831 613 aa8.78□□□□□ -1
GTF3C2-202ENST00000359541 KRT8P05787 483 aa8.78□□□□□ -1
GTF3C2-202ENST00000359541 CEACAM5P06731 702 aa8.78□□□□□ -1
GTF3C2-202ENST00000359541 HOXB2P14652 356 aa8.78□□□□□ -1
GTF3C2-202ENST00000359541 FCARP24071 287 aa8.78□□□□□ -1
GTF3C2-202ENST00000359541 FEN1P39748 380 aaKnown RBP8.78□□□□□ -1
GTF3C2-202ENST00000359541 RGS8P57771 180 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms