RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 ZNF860A6NHJ4 632 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 TTC36A6NLP5 189 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 WASHC1A8K0Z3 465 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 G3V2T6 193 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 H3BMH7 237 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 I3L1I5 382 aaPredicted RBP12.65□□□□□ -0.38
CCDC197-201ENST00000359253 UPK1AO00322 258 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 ACOX3O15254 700 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 SLC28A2O43868 658 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 COQ9O75208 318 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 GCM2O75603 506 aaPredicted RBP12.65□□□□□ -0.38
CCDC197-201ENST00000359253 LDOC1O95751 146 aaPredicted RBP12.65□□□□□ -0.38
CCDC197-201ENST00000359253 AK1P00568 194 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 OR12D1P0DN82 309 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 NR2F1P10589 423 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 ZNF23P17027 643 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 CSF2RBP32927 897 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 MC3RP41968 323 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 GCGRP47871 477 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 OLR1P78380 273 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 KCNC4Q03721 635 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 ILKQ13418 452 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 TRA2AQ13595 282 aaKnown RBP eCLIP12.65□□□□□ -0.38
CCDC197-201ENST00000359253 NKG7Q16617 165 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 RFX4Q33E94 735 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 OR2T5Q6IEZ7 315 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 ST13P4Q8IZP2 240 aaPredicted RBP12.65□□□□□ -0.38
CCDC197-201ENST00000359253 GALNT4Q8N4A0 578 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 FAM86B1Q8N7N1 296 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 OR5T3Q8NGG3 340 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 OR2T29Q8NH02 315 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 ADAMTS15Q8TE58 950 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 XAGE5Q8WWM1 108 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 ANKRD9Q96BM1 317 aaPredicted RBP12.65□□□□□ -0.38
CCDC197-201ENST00000359253 MMABQ96EY8 250 aaPredicted RBP12.65□□□□□ -0.38
CCDC197-201ENST00000359253 TMEM19Q96HH6 336 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 ZNF570Q96NI8 536 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 TRNT1Q96Q11 434 aaKnown RBP12.65□□□□□ -0.38
CCDC197-201ENST00000359253 NDC1Q9BTX1 674 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 NTN4Q9HB63 628 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 PRTFDC1Q9NRG1 225 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 USE1Q9NZ43 259 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 TRPC4Q9UBN4 977 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 KLHL3Q9UH77 587 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 PCDHGA1Q9Y5H4 931 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 U3KQA8 63 aa12.65□□□□□ -0.38
CCDC197-201ENST00000359253 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 CPED1A4D0V7 1026 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 FAM149AA5PLN7 773 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 SAC3D1A6NKF1 404 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 TMEM150CB9EJG8 249 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 DSCR3O14972 297 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 ADAMDEC1O15204 470 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 ZNF749O43361 778 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 FGF17O60258 216 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 BCHEP06276 602 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 GUSBP08236 651 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 CKMT2P17540 419 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 DNAJA1P31689 397 aaKnown RBP12.64□□□□□ -0.39
CCDC197-201ENST00000359253 MAN2A2P49641 1150 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 SEPHS1P49903 392 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 ALDH3A2P51648 485 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 PRKAG1P54619 331 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 KCNJ10P78508 379 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 DAB2P98082 770 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 DUSP2Q05923 314 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 STX4Q12846 297 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 LASP1Q14847 261 aaKnown RBP12.64□□□□□ -0.39
CCDC197-201ENST00000359253 GPR19Q15760 415 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 PRICKLE4Q2TBC4 344 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 ZNF750Q32MQ0 723 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 PROX2Q3B8N5 592 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 GUSBP11Q6P575 273 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 SZRD1Q7Z422 152 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 ARHGAP22Q7Z5H3 698 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 MARVELD2Q8N4S9 558 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 CBR4Q8N4T8 237 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 EID2Q8N6I1 236 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 CDRT4Q8N9R6 151 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 FAM110BQ8TC76 370 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 TMBIM1Q969X1 311 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 COL26A1Q96A83 441 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 TAMM41Q96BW9 452 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 CTHRC1Q96CG8 243 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 GIMAP5Q96F15 307 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 RBM18Q96H35 190 aaKnown RBP12.64□□□□□ -0.39
CCDC197-201ENST00000359253 TPD52L3Q96J77 140 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 C7orf34Q96L11 122 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 STACQ99469 402 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 RBM4BQ9BQ04 359 aaKnown RBP12.64□□□□□ -0.39
CCDC197-201ENST00000359253 RBM4Q9BWF3 364 aaKnown RBP12.64□□□□□ -0.39
CCDC197-201ENST00000359253 SPRTNQ9H040 489 aaPredicted RBP12.64□□□□□ -0.39
CCDC197-201ENST00000359253 GPC6Q9Y625 555 aaPredicted RBP12.64□□□□□ -0.39
CCDC197-201ENST00000359253 CEP250Q9BV73 2442 aa12.64□□□□□ -0.39
CCDC197-201ENST00000359253 NUP214P35658 2090 aaPredicted RBP12.64□□□□□ -0.39
CCDC197-201ENST00000359253 DCDC2BA2VCK2 349 aa12.63□□□□□ -0.39
CCDC197-201ENST00000359253 SOCS2O14508 198 aa12.63□□□□□ -0.39
CCDC197-201ENST00000359253 CASC3O15234 703 aaKnown RBP12.63□□□□□ -0.39
CCDC197-201ENST00000359253 OR10H2O60403 315 aa12.63□□□□□ -0.39
CCDC197-201ENST00000359253 DNAJB6O75190 326 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms