RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 COX10Q12887 443 aa11.93□□□□□ -0.5
GGPS1-202ENST00000358966 SLC9A5Q14940 896 aa11.93□□□□□ -0.5
GGPS1-202ENST00000358966 LTB4RQ15722 352 aa11.93□□□□□ -0.5
GGPS1-202ENST00000358966 MAPK11Q15759 364 aa11.93□□□□□ -0.5
GGPS1-202ENST00000358966 GPR19Q15760 415 aa11.93□□□□□ -0.5
GGPS1-202ENST00000358966 CLVS2Q5SYC1 327 aa11.93□□□□□ -0.5
GGPS1-202ENST00000358966 RSBN1Q5VWQ0 802 aaPredicted RBP11.93□□□□□ -0.5
GGPS1-202ENST00000358966 SHEQ5VZ18 495 aa11.93□□□□□ -0.5
GGPS1-202ENST00000358966 IKBIPQ70UQ0 350 aa11.93□□□□□ -0.5
GGPS1-202ENST00000358966 SLC22A16Q86VW1 577 aa11.93□□□□□ -0.5
GGPS1-202ENST00000358966 ZDHHC21Q8IVQ6 265 aa11.93□□□□□ -0.5
GGPS1-202ENST00000358966 PJA1Q8NG27 643 aa11.93□□□□□ -0.5
GGPS1-202ENST00000358966 OR5T3Q8NGG3 340 aa11.93□□□□□ -0.5
GGPS1-202ENST00000358966 OSBPL11Q9BXB4 747 aa11.93□□□□□ -0.5
GGPS1-202ENST00000358966 RSPO3Q9BXY4 272 aaPredicted RBP11.93□□□□□ -0.5
GGPS1-202ENST00000358966 SERHL2Q9H4I8 314 aa11.93□□□□□ -0.5
GGPS1-202ENST00000358966 NT5DC2Q9H857 520 aa11.93□□□□□ -0.5
GGPS1-202ENST00000358966 TM9SF3Q9HD45 589 aa11.93□□□□□ -0.5
GGPS1-202ENST00000358966 SNX7Q9UNH6 387 aa11.93□□□□□ -0.5
GGPS1-202ENST00000358966 MRPS17Q9Y2R5 130 aaKnown RBP11.93□□□□□ -0.5
GGPS1-202ENST00000358966 ZNF451Q9Y4E5 1061 aa11.93□□□□□ -0.5
GGPS1-202ENST00000358966 NOL3O60936 208 aaKnown RBP11.92□□□□□ -0.5
GGPS1-202ENST00000358966 DEAF1O75398 565 aaPredicted RBP11.92□□□□□ -0.5
GGPS1-202ENST00000358966 PRSS23O95084 383 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 RASAL1O95294 804 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 FCGR1AP12314 374 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 ST6GAL1P15907 406 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 ATF4P18848 351 aaPredicted RBP11.92□□□□□ -0.5
GGPS1-202ENST00000358966 PRIM2P49643 509 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 NCBP2P52298 156 aaKnown RBP eCLIP11.92□□□□□ -0.5
GGPS1-202ENST00000358966 PCBP4P57723 403 aaKnown RBP11.92□□□□□ -0.5
GGPS1-202ENST00000358966 SPDYE7PQ495Y7 208 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 CEACAM20Q6UY09 585 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 CEP68Q76N32 757 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 ASPGQ86U10 573 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 OR5H6Q8NGV6 325 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 GOT1L1Q8NHS2 421 aaPredicted RBP11.92□□□□□ -0.5
GGPS1-202ENST00000358966 TM9SF2Q99805 663 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 BDH2Q9BUT1 245 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 ADI1Q9BV57 179 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 C1GALT1Q9NS00 363 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 WNT16Q9UBV4 365 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 BOLA1Q9Y3E2 137 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 GPR179Q6PRD1 2367 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 A0A1W2PR77 199 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 CD27P26842 260 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 AHRP35869 848 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 POLR2IP36954 125 aaKnown RBP11.92□□□□□ -0.5
GGPS1-202ENST00000358966 RPS9P46781 194 aaKnown RBP11.92□□□□□ -0.5
GGPS1-202ENST00000358966 SCARB2Q14108 478 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 INTS11Q5TA45 600 aaKnown RBP11.92□□□□□ -0.5
GGPS1-202ENST00000358966 SPRED1Q7Z699 444 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 ADHFE1Q8IWW8 467 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 ZNF786Q8N393 782 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 AVL9Q8NBF6 648 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 TTLQ8NG68 377 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 OR52N2Q8NGI0 321 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 C9orf16Q9BUW7 83 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.92□□□□□ -0.5
GGPS1-202ENST00000358966 EQTNQ9NQ60 294 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 FSCN3Q9NQT6 498 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 POT1Q9NUX5 634 aa11.92□□□□□ -0.5
GGPS1-202ENST00000358966 A0A1W2PQ72 361 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 OR5K4A6NMS3 321 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 H0YGG7 62 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 TLR4O00206 839 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 BCHEP06276 602 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 GPC1P35052 558 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 OR3A3P47888 321 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 RAD23AP54725 363 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 ARF3P61204 181 aaPredicted RBP11.91□□□□□ -0.5
GGPS1-202ENST00000358966 GPLD1P80108 840 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 SIM1P81133 766 aaPredicted RBP11.91□□□□□ -0.5
GGPS1-202ENST00000358966 KIR2DS3Q14952 304 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 CYBRD1Q53TN4 286 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 NKAIN2Q5VXU1 208 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 TMEM107Q6UX40 140 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 FAM92BQ6ZTR7 304 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 FAM109AQ8N4B1 249 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 C11orf65Q8NCR3 313 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 SUN3Q8TAQ9 357 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 UTP15Q8TED0 518 aaKnown RBP11.91□□□□□ -0.5
GGPS1-202ENST00000358966 TRIM63Q969Q1 353 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 COL26A1Q96A83 441 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 AMDHD1Q96NU7 426 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 TMEM246Q9BRR3 403 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 RBCK1Q9BYM8 510 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 POLR1BQ9H9Y6 1135 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 WDR70Q9NW82 654 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 ADPRHL2Q9NX46 363 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 PRAMEF25A6NGN4 478 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 G3V2T6 193 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 MAN1A2O60476 641 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 MITFO75030 526 aaPredicted RBP11.91□□□□□ -0.5
GGPS1-202ENST00000358966 KRT8P05787 483 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 RRM2P31350 389 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 ARSFP54793 590 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 VSX2P58304 361 aaPredicted RBP11.91□□□□□ -0.5
GGPS1-202ENST00000358966 MRPS15P82914 257 aaKnown RBP11.91□□□□□ -0.5
GGPS1-202ENST00000358966 IL1RL1Q01638 556 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms