RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PCCBP05166 539 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 CNR2P34972 360 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 MRPS10P82664 201 aaKnown RBP8.38□□□□□ -1.07
COL6A6-201ENST00000358511 PEA15Q15121 130 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 CYP27C1Q4G0S4 372 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 CLVS2Q5SYC1 327 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 ENTHD1Q8IYW4 607 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 ZCCHC10Q8TBK6 192 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 LIN37Q96GY3 246 aaPredicted RBP8.38□□□□□ -1.07
COL6A6-201ENST00000358511 TTTY10Q9BZA0 68 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 ARHGAP39Q9C0H5 1083 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 PLCH1Q4KWH8 1693 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 POM121CA8CG34 1229 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 WDPCPO95876 746 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 AMY2AP04746 511 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 ATP5A1P25705 553 aaKnown RBP8.38□□□□□ -1.07
COL6A6-201ENST00000358511 CPOXP36551 454 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 GAS6Q14393 721 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 STK11Q15831 433 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 SFRP4Q6FHJ7 346 aaPredicted RBP8.38□□□□□ -1.07
COL6A6-201ENST00000358511 DTX3Q8N9I9 347 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 GIMAP1Q8WWP7 306 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 SLC30A3Q99726 388 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 ADAP2Q9NPF8 381 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 RXFP3Q9NSD7 469 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 B3GNT2Q9NY97 397 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 COPS3Q9UNS2 423 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 CYP8B1Q9UNU6 501 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 HEMK1Q9Y5R4 338 aaPredicted RBP8.38□□□□□ -1.07
COL6A6-201ENST00000358511 FGF19O95750 216 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 DDOSTP39656 456 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 CLDN8P56748 225 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 RPS13P62277 151 aaKnown RBP8.38□□□□□ -1.07
COL6A6-201ENST00000358511 DEFB128Q7Z7B8 93 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 ZFP41Q8N8Y5 198 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 ZNF705GA8MUZ8 300 aaPredicted RBP8.38□□□□□ -1.07
COL6A6-201ENST00000358511 TOR1AO14656 332 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 DCNP07585 359 aaKnown RBP8.38□□□□□ -1.07
COL6A6-201ENST00000358511 BDKRB2P30411 391 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 KCNQ1P51787 676 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 SERPINA11Q86U17 422 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 UPF1Q92900 1129 aaKnown RBP eCLIP8.38□□□□□ -1.07
COL6A6-201ENST00000358511 RBPMSQ93062 196 aaKnown RBP8.38□□□□□ -1.07
COL6A6-201ENST00000358511 LMLNQ96KR4 655 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 ALG8Q9BVK2 526 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 GPR89AB7ZAQ6 455 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 NPIPA5E9PKD4 350 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 BLOC1S5-TXNDC5H3BN57 136 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 GPR89BP0CG08 455 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 OSMP13725 252 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 BRAT1Q6PJG6 821 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 TMIGD1Q6UXZ0 262 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 DBF4BQ8NFT6 615 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 OR4K1Q8NGD4 311 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 SLC22A8Q8TCC7 542 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 NPIPA1Q9UND3 350 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 DOCK5Q9H7D0 1870 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 A0A0D9SG52 128 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 TTC24A2A3L6 582 aaPredicted RBP8.37□□□□□ -1.07
COL6A6-201ENST00000358511 RDH16O75452 317 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 SCO1O75880 301 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 CD9P21926 228 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 PCGF2P35227 344 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 PTCHD3Q3KNS1 767 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 CRTC1Q6UUV9 634 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 RFPL4BQ6ZWI9 263 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 PAQR8Q8TEZ7 354 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 PINK1Q9BXM7 581 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 APMAPQ9HDC9 416 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 H3BSH0 61 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 SHOXO15266 292 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 ERI3O43414 337 aaKnown RBP8.37□□□□□ -1.07
COL6A6-201ENST00000358511 OR8U9P0C7N5 309 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 ZDHHC11BP0C7U3 371 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 GABRB3P28472 473 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 TNFSF8P32971 234 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 AQP2P41181 271 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 SERINC3Q13530 473 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 BBS1Q8NFJ9 593 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 SMARCD2Q92925 531 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 TSGA13Q96PP4 275 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 UFSP2Q9NUQ7 469 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 FAM86C1Q9NVL1 165 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 ARFGEF1Q9Y6D6 1849 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 ZNF541Q9H0D2 1346 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 SNED1Q8TER0 1413 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 CELF2O95319 508 aaKnown RBP8.37□□□□□ -1.07
COL6A6-201ENST00000358511 ADRB3P13945 408 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 RPL10P27635 214 aaKnown RBP8.37□□□□□ -1.07
COL6A6-201ENST00000358511 TAS2R31P59538 309 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 RAB40BQ12829 278 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 SLC39A4Q6P5W5 647 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 RETREG3Q86VR2 466 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 DCUN1D3Q8IWE4 304 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 SUMF2Q8NBJ7 301 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 NLGN2Q8NFZ4 835 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 SLC39A13Q96H72 371 aa8.37□□□□□ -1.07
COL6A6-201ENST00000358511 FUBP3Q96I24 572 aaKnown RBP eCLIP8.37□□□□□ -1.07
COL6A6-201ENST00000358511 GLIS2Q9BZE0 524 aaPredicted RBP8.37□□□□□ -1.07
COL6A6-201ENST00000358511 YARS2Q9Y2Z4 477 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms