RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 TIMM50Q3ZCQ8 353 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 C6orf132Q5T0Z8 1188 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 SLC35F1Q5T1Q4 408 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 FAM109BQ6ICB4 259 aaPredicted RBP7.8□□□□□ -1.16
CD46-205ENST00000358170 LCTLQ6UWM7 567 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 C16orf62Q7Z3J2 963 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 RASGRP3Q8IV61 690 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 TRIM48Q8IWZ4 208 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 YAF2Q8IY57 180 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 KLHDC8AQ8IYD2 350 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 KCT2Q8NC54 265 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 OR5K2Q8NHB8 316 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 UBASH3BQ8TF42 649 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 SETD7Q8WTS6 366 aaKnown RBP7.8□□□□□ -1.16
CD46-205ENST00000358170 METTL2AQ96IZ6 378 aaKnown RBP7.8□□□□□ -1.16
CD46-205ENST00000358170 RAD9AQ99638 391 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 KXD1Q9BQD3 176 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 TMED9Q9BVK6 235 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 HDHD5Q9BXW7 423 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 ZNF717Q9BY31 904 aaPredicted RBP7.8□□□□□ -1.16
CD46-205ENST00000358170 TTTY10Q9BZA0 68 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 HHATLQ9HCP6 504 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 MRPS30Q9NP92 439 aaKnown RBP7.8□□□□□ -1.16
CD46-205ENST00000358170 LHX9Q9NQ69 397 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 SIRT3Q9NTG7 399 aaPredicted RBP7.8□□□□□ -1.16
CD46-205ENST00000358170 DPP7Q9UHL4 492 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 SSR3Q9UNL2 185 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 ENTPD4Q9Y227 616 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 HELZP42694 1942 aaKnown RBP7.8□□□□□ -1.16
CD46-205ENST00000358170 A0A1B0GVC2 190 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 A6NIN4 97 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 FCMRO60667 390 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 KAT7O95251 611 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 PRMT2P55345 433 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 MRPS15P82914 257 aaKnown RBP7.8□□□□□ -1.16
CD46-205ENST00000358170 CHRNEQ04844 493 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 FBXO43Q4G163 708 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 ZNF311Q5JNZ3 666 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 TOR1AIP1Q5JTV8 583 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 CCNJQ5T5M9 372 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 AGAP7PQ5VUJ5 663 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 ZNF367Q7RTV3 350 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 UBE3DQ7Z6J8 389 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 CPA6Q8N4T0 437 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 FBXL6Q8N531 539 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 FRMD1Q8N878 549 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 ZNF707Q96C28 371 aaPredicted RBP7.8□□□□□ -1.16
CD46-205ENST00000358170 CRELD1Q96HD1 420 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 ZNF354BQ96LW1 612 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 QRFPRQ96P65 431 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 SIGLEC11Q96RL6 698 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 IL23AQ9NPF7 189 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 PLCXD1Q9NUJ7 323 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 CFL2Q9Y281 166 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 GPR55Q9Y2T6 319 aaPredicted RBP7.8□□□□□ -1.16
CD46-205ENST00000358170 NPIPA5A0A0B4J1W7 369 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 A0A1W2PR48 441 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 NPIPA7E9PJI5 369 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 KMOO15229 486 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 VEGFDO43915 354 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 SNRNP200O75643 2136 aaKnown RBP7.8□□□□□ -1.16
CD46-205ENST00000358170 NCR1O76036 304 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 PDE9AO76083 593 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 ADAP00813 363 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 RPN2P04844 631 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 CHRM4P08173 479 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 LINC00271P0C7V0 271 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 GSTT2P0CG29 244 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 GSTT2BP0CG30 244 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 NPIPA8P0DM63 369 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 DDX5P17844 614 aaKnown RBP7.8□□□□□ -1.16
CD46-205ENST00000358170 CSTF2P33240 577 aaKnown RBP eCLIP7.8□□□□□ -1.16
CD46-205ENST00000358170 SDC2P34741 201 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 CD79BP40259 229 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 ETV5P41161 510 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 BCL6P41182 706 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 MAPK9P45984 424 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 KCNJ5P48544 419 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 GIPRP48546 466 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 MAN2A2P49641 1150 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 ETV1P50549 477 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 RAB25P57735 213 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 SIM1P81133 766 aaPredicted RBP7.8□□□□□ -1.16
CD46-205ENST00000358170 SFSWAPQ12872 951 aaKnown RBP7.8□□□□□ -1.16
CD46-205ENST00000358170 SF3B4Q15427 424 aaKnown RBP eCLIP7.8□□□□□ -1.163e-8■■■■■ 38.2
CD46-205ENST00000358170 TJAP1Q5JTD0 557 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 PIP5KL1Q5T9C9 394 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 NXNL2Q5VZ03 156 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 SAXO2Q658L1 398 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 UNC5DQ6UXZ4 953 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 GHDCQ8N2G8 530 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 RAB42Q8N4Z0 105 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 ACOT4Q8N9L9 421 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 WFIKKN2Q8TEU8 576 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 ZFPM2Q8WW38 1151 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 RELTQ969Z4 430 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 OTUB2Q96DC9 234 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 AMDHD1Q96NU7 426 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 SMURF1Q9HCE7 757 aa7.8□□□□□ -1.16
CD46-205ENST00000358170 NEUROD4Q9HD90 331 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms