RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 PRPF19Q9UMS4 504 aaKnown RBP8.6□□□□□ -1.03
UPF2-202ENST00000357604 A0A087WV62 115 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 MCIDASD6RGH6 385 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 DNAJC8O75937 253 aaPredicted RBP8.6□□□□□ -1.03
UPF2-202ENST00000357604 HK1P19367 917 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 CAPZA2P47755 286 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 CTBP2P56545 445 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 PPP1CAP62136 330 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 MYBPC3Q14896 1274 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 GPR68Q15743 365 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 VWA2Q5GFL6 755 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 WLSQ5T9L3 541 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 OR4K3Q96R72 315 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 ZNF559Q9BR84 538 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 DOHHQ9BU89 302 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 PRDM4Q9UKN5 801 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 WDR45Q9Y484 360 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 MYO9BQ13459 2157 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 NOTCH4Q99466 2003 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 ELOVL7A1L3X0 281 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 FRG2CA6NGY1 282 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 EEDO75530 441 aaKnown RBP8.6□□□□□ -1.03
UPF2-202ENST00000357604 BSGP35613 385 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 UFM1P61960 85 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 KLRB1Q12918 225 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 GRAMD1BQ3KR37 738 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 ZNF766Q5HY98 468 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 RAET1LQ5VY80 246 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 TNFAIP8L2Q6P589 184 aaPredicted RBP8.6□□□□□ -1.03
UPF2-202ENST00000357604 MZB1Q8WU39 189 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 TP53INP1Q96A56 240 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 RNF31Q96EP0 1072 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 ASPNQ9BXN1 380 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 EPB41L4BQ9H329 900 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 MMP25Q9NPA2 562 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 FARSBQ9NSD9 589 aaKnown RBP8.6□□□□□ -1.03
UPF2-202ENST00000357604 PILRAQ9UKJ1 303 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 CLIC1O00299 241 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 P2RX6O15547 441 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 EFSO43281 561 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 SCO2O43819 266 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 FKBP2P26885 142 aaKnown RBP8.6□□□□□ -1.03
UPF2-202ENST00000357604 CA5AP35218 305 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 KCNAB2Q13303 367 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 FAM71E1Q6IPT2 247 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 TACO1Q9BSH4 297 aaKnown RBP8.6□□□□□ -1.03
UPF2-202ENST00000357604 VN1R1Q9GZP7 353 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 SLC26A1Q9H2B4 701 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 MCCC2Q9HCC0 563 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 ACAD8Q9UKU7 415 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 RAXQ9Y2V3 346 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 LINC01387J3KSC0 135 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 SDHDO14521 159 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 LSM1O15116 133 aaKnown RBP8.59□□□□□ -1.03
UPF2-202ENST00000357604 SDC1P18827 310 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 POU3F2P20265 443 aaPredicted RBP8.59□□□□□ -1.03
UPF2-202ENST00000357604 HTR6P50406 440 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 RNF130Q86XS8 419 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 BCORP1Q8N888 145 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 OR8J3Q8NGG0 315 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 GOT1L1Q8NHS2 421 aaPredicted RBP8.59□□□□□ -1.03
UPF2-202ENST00000357604 NKD1Q969G9 470 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 PIGQQ9BRB3 760 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 MTHFD2LQ9H903 347 aaPredicted RBP8.59□□□□□ -1.03
UPF2-202ENST00000357604 PDP2Q9P2J9 529 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 A0A1W2PP18 115 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 PRRG2O14669 202 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 BAG2O95816 211 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 MC3RP41968 323 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 CSNK2A1P68400 391 aaPredicted RBP8.59□□□□□ -1.03
UPF2-202ENST00000357604 UBAP2LQ14157 1087 aaKnown RBP8.59□□□□□ -1.03
UPF2-202ENST00000357604 LASP1Q14847 261 aaKnown RBP8.59□□□□□ -1.03
UPF2-202ENST00000357604 SPRED3Q2MJR0 410 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 SLC25A25Q6KCM7 469 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 IL20RBQ6UXL0 311 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 C6orf120Q7Z4R8 191 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 ANKRD46Q86W74 232 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 CMIPQ8IY22 773 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 OR52E4Q8NGH9 312 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 TRIM2Q9C040 744 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 ZBTB20Q9HC78 741 aaPredicted RBP8.59□□□□□ -1.03
UPF2-202ENST00000357604 APMAPQ9HDC9 416 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 MCTS1Q9ULC4 181 aaKnown RBP8.59□□□□□ -1.03
UPF2-202ENST00000357604 ABCG2Q9UNQ0 655 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 PRAMEF25A6NGN4 478 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 MAN1A2O60476 641 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 CENPAP49450 140 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 MAN2A2P49641 1150 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 SLC26A5P58743 744 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 FGFBP1Q14512 234 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 ZNF169Q14929 603 aaPredicted RBP8.59□□□□□ -1.03
UPF2-202ENST00000357604 OR1C1Q15619 314 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 SYT16Q17RD7 645 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 DCST2Q5T1A1 773 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 TTC33Q6PID6 262 aaPredicted RBP8.59□□□□□ -1.03
UPF2-202ENST00000357604 PRICKLE2Q7Z3G6 844 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 LGI4Q8N135 537 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 OR8K3Q8NH51 312 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 OR5AK3PQ8NH89 298 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 SARAFQ96BY9 339 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms