RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 PRRG1O14668 218 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 TPD52L2O43399 206 aaKnown RBP10.79□□□□□ -0.68
CAPN9-202ENST00000354537 HPGDSO60760 199 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 EPHX1P07099 455 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 LIMS3P0CW19 117 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 LIMS4P0CW20 117 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 PRKAR2AP13861 404 aaKnown RBP10.79□□□□□ -0.68
CAPN9-202ENST00000354537 INPP1P49441 399 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 ZNF157P51786 506 aaPredicted RBP10.79□□□□□ -0.68
CAPN9-202ENST00000354537 ATP12AP54707 1039 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 CYP4F8P98187 520 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 BDH1Q02338 343 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 IL18Q14116 193 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 GPNMBQ14956 572 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 SLC27A4Q6P1M0 643 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 TNFAIP8L2Q6P589 184 aaPredicted RBP10.79□□□□□ -0.68
CAPN9-202ENST00000354537 TMEM220Q6QAJ8 160 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 TMIGD1Q6UXZ0 262 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 GJD3Q8N144 294 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 IQCF1Q8N6M8 205 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 CHST14Q8NCH0 376 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 OR52N1Q8NH53 320 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 GATAD2BQ8WXI9 593 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 SMG7Q92540 1137 aaKnown RBP10.79□□□□□ -0.68
CAPN9-202ENST00000354537 OTULINQ96BN8 352 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 UPRTQ96BW1 309 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 TM4SF18Q96CE8 201 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 MED17Q9NVC6 651 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 NLKQ9UBE8 527 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 CBLCQ9ULV8 474 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 EXOGQ9Y2C4 368 aaKnown RBP10.79□□□□□ -0.68
CAPN9-202ENST00000354537 INSL5Q9Y5Q6 135 aa10.79□□□□□ -0.68
CAPN9-202ENST00000354537 LINC00862A6NCI5 91 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 C12orf71A8MTZ7 269 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 CASC3O15234 703 aaKnown RBP10.78□□□□□ -0.68
CAPN9-202ENST00000354537 AKAP8O43823 692 aaKnown RBP10.78□□□□□ -0.68
CAPN9-202ENST00000354537 RFPL3O75679 317 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 ETV3P41162 512 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 RECQLP46063 649 aaPredicted RBP10.78□□□□□ -0.68
CAPN9-202ENST00000354537 GNA13Q14344 377 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 SMUG1Q53HV7 270 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 IER5LQ5T953 404 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 OR2G6Q5TZ20 316 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 PRAMEF8Q5VWM4 474 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 PRAMEF7Q5VXH5 474 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 IDO2Q6ZQW0 420 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 RBM45Q8IUH3 476 aaKnown RBP10.78□□□□□ -0.68
CAPN9-202ENST00000354537 ANKK1Q8NFD2 765 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 OR2A12Q8NGT7 310 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 TEX47Q8TBZ9 253 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 MRPS31Q92665 395 aaKnown RBP10.78□□□□□ -0.68
CAPN9-202ENST00000354537 KCTD12Q96CX2 325 aaKnown RBP10.78□□□□□ -0.68
CAPN9-202ENST00000354537 GPR137Q96N19 417 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 DCLRE1CQ96SD1 692 aaKnown RBP10.78□□□□□ -0.68
CAPN9-202ENST00000354537 BTBD1Q9H0C5 482 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 PIGUQ9H490 435 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 B3GAT2Q9NPZ5 323 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 SIRT3Q9NTG7 399 aaPredicted RBP10.78□□□□□ -0.68
CAPN9-202ENST00000354537 MAN2C1Q9NTJ4 1040 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 SH2B3Q9UQQ2 575 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 AUP1Q9Y679 476 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 RNF215Q9Y6U7 377 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 SLC28A2O43868 658 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 BNIP3LO60238 219 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 TIMP2P16035 220 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 PDHA2P29803 388 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 PPP2R1BP30154 601 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 SSTR4P31391 388 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 IFNA8P32881 189 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 ANXA11P50995 505 aaKnown RBP10.78□□□□□ -0.68
CAPN9-202ENST00000354537 TRA2BP62995 288 aaKnown RBP10.78□□□□□ -0.68
CAPN9-202ENST00000354537 PIN1Q13526 163 aaPredicted RBP10.78□□□□□ -0.68
CAPN9-202ENST00000354537 ARHGEF6Q15052 776 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 SPDYE7PQ495Y7 208 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 HSD17B12Q53GQ0 312 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 TMEM107Q6UX40 140 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 LYPD8Q6UX82 237 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 RASSF6Q6ZTQ3 369 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 FAM129CQ86XR2 697 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 TMC8Q8IU68 726 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 C9orf62Q8N4C0 152 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 OR4M1Q8NGD0 313 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 FOXJ1Q92949 421 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 TM9SF2Q99805 663 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 TREX2Q9BQ50 279 aaPredicted RBP10.78□□□□□ -0.68
CAPN9-202ENST00000354537 PITHD1Q9GZP4 211 aaPredicted RBP10.78□□□□□ -0.68
CAPN9-202ENST00000354537 SAP130Q9H0E3 1048 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 ANKRD19PQ9H560 264 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 C11orf49Q9H6J7 331 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 RANBP3Q9H6Z4 567 aaPredicted RBP10.78□□□□□ -0.68
CAPN9-202ENST00000354537 PELI2Q9HAT8 420 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 EMC7Q9NPA0 242 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 SLAMF7Q9NQ25 335 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 WDR70Q9NW82 654 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 ADAM29Q9UKF5 820 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 ING4Q9UNL4 249 aa10.78□□□□□ -0.68
CAPN9-202ENST00000354537 YARS2Q9Y2Z4 477 aaKnown RBP10.78□□□□□ -0.68
CAPN9-202ENST00000354537 C17orf113A0A1B0GUU1 675 aa10.77□□□□□ -0.69
CAPN9-202ENST00000354537 A0A1W2PQ72 361 aa10.77□□□□□ -0.69
CAPN9-202ENST00000354537 B8ZZF3 427 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms