RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 NRG4Q8WWG1 115 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 BORCS5Q969J3 196 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 HSPBAP1Q96EW2 488 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 FAR2Q96K12 515 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 RUNDC3BQ96NL0 473 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 TRIB1Q96RU8 372 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 ECSITQ9BQ95 431 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 MRPS26Q9BYN8 205 aaKnown RBP10.3□□□□□ -0.76
RTN3-204ENST00000354497 OR8D2Q9GZM6 311 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 UBTD1Q9HAC8 227 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 ADAP2Q9NPF8 381 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 TBC1D23Q9NUY8 699 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 INTS10Q9NVR2 710 aaKnown RBP10.3□□□□□ -0.76
RTN3-204ENST00000354497 ZNF629Q9UEG4 869 aaPredicted RBP10.3□□□□□ -0.76
RTN3-204ENST00000354497 ZFP69BQ9UJL9 534 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 BOKQ9UMX3 212 aaPredicted RBP10.3□□□□□ -0.76
RTN3-204ENST00000354497 PDE10AQ9Y233 779 aa10.3□□□□□ -0.76
RTN3-204ENST00000354497 SH3D21A4FU49 640 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 NOTOA8MTQ0 251 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 C4orf51C9J302 202 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 TGFBR3LH3BV60 316 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 CLDN4O14493 209 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 CRLF1O75462 422 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 RSL1D1O76021 490 aaKnown RBP10.29□□□□□ -0.76
RTN3-204ENST00000354497 LRATO95237 230 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 EPPINO95925 133 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 HIST1H2AGP0C0S8 130 aaPredicted RBP10.29□□□□□ -0.76
RTN3-204ENST00000354497 COL6A2P12110 1019 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 NPPBP16860 134 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 PAMP19021 973 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 HIST1H2ADP20671 130 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 CEACAM8P31997 349 aaPredicted RBP10.29□□□□□ -0.76
RTN3-204ENST00000354497 CPA2P48052 419 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 B2MP61769 119 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 THOC5Q13769 683 aaKnown RBP10.29□□□□□ -0.76
RTN3-204ENST00000354497 CSHL1Q14406 222 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 HYAL4Q2M3T9 481 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 SLX4IPQ5VYV7 408 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 HMBOX1Q6NT76 420 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 CASC4Q6P4E1 433 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 OPN5Q6U736 354 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 CILP2Q8IUL8 1156 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 LSMEM1Q8N8F7 131 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 ZNF321PQ8N8H1 164 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 NEIL3Q8TAT5 605 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 CD200R1Q8TD46 325 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 ACTRT1Q8TDG2 376 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 RASSF5Q8WWW0 418 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 KCNJ9Q92806 393 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 PIGTQ969N2 578 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 HIST1H2AHQ96KK5 128 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 SGCZQ96LD1 299 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 TSNARE1Q96NA8 513 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 CCL19Q99731 98 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 HIST1H2AJQ99878 128 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 H2AFJQ9BTM1 129 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 KIFC1Q9BW19 673 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 RBM24Q9BX46 236 aaKnown RBP10.29□□□□□ -0.76
RTN3-204ENST00000354497 SGPP1Q9BX95 441 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 LACRTQ9GZZ8 138 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 SPNS1Q9H2V7 528 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 ZNF703Q9H7S9 590 aaPredicted RBP10.29□□□□□ -0.76
RTN3-204ENST00000354497 FAF1Q9UNN5 650 aaPredicted RBP10.29□□□□□ -0.76
RTN3-204ENST00000354497 PPIEQ9UNP9 301 aaKnown RBP10.29□□□□□ -0.76
RTN3-204ENST00000354497 CAMK2AQ9UQM7 478 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 DHRS7Q9Y394 339 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 UTP11Q9Y3A2 253 aaKnown RBP10.29□□□□□ -0.76
RTN3-204ENST00000354497 ACTL7BQ9Y614 415 aa10.29□□□□□ -0.76
RTN3-204ENST00000354497 SYCE1LA8MT33 242 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 AHRRA9YTQ3 701 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 H3BNX3 289 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 AP3B1O00203 1094 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 CCDC22O60826 627 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 FKBP6O75344 327 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 FTCDO95954 541 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 C8GP07360 202 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 CTRB1P17538 263 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 GDF1P27539 372 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 GALNT1Q10472 559 aaPredicted RBP10.28□□□□□ -0.76
RTN3-204ENST00000354497 CTBP1Q13363 440 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 MED21Q13503 144 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 OASLQ15646 514 aaKnown RBP10.28□□□□□ -0.76
RTN3-204ENST00000354497 ELAVL1Q15717 326 aaKnown RBP10.28□□□□□ -0.76
RTN3-204ENST00000354497 ZNF829Q3KNS6 432 aaPredicted RBP10.28□□□□□ -0.76
RTN3-204ENST00000354497 CTRB2Q6GPI1 263 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 KIAA0930Q6ICG6 404 aaPredicted RBP10.28□□□□□ -0.76
RTN3-204ENST00000354497 ZNF549Q6P9A3 640 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 POMZP3Q6PJE2 187 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 FRA10AC1Q70Z53 315 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 LUZP2Q86TE4 346 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 DENND6AQ8IWF6 608 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 PCYOX1LQ8NBM8 494 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 TMEM52Q8NDY8 209 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 ABHD11Q8NFV4 315 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 CALML6Q8TD86 181 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 GIPC3Q8TF64 312 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 SLC5A11Q8WWX8 675 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 DAZLQ92904 295 aaKnown RBP10.28□□□□□ -0.76
RTN3-204ENST00000354497 MAGEB18Q96M61 343 aa10.28□□□□□ -0.76
RTN3-204ENST00000354497 ZNF696Q9H7X3 374 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms