RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 NAA10P41227 235 aaPredicted RBP12.98□□□□□ -0.33
SMC6-201ENST00000351948 GDI2P50395 445 aaKnown RBP12.98□□□□□ -0.33
SMC6-201ENST00000351948 SRYQ05066 204 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 KLHL36Q8N4N3 616 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 FATE1Q969F0 183 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 KLHL42Q9P2K6 505 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 GNG8Q9UK08 70 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 FCER2P06734 321 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 DCDC1P59894 354 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 MAPK14Q16539 360 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 IKBIPQ70UQ0 350 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 HS3ST5Q8IZT8 346 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 PACRGLQ8N7B6 248 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 OR2L3Q8NG85 312 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 COX4I2Q96KJ9 171 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 ZFP3Q96NJ6 502 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 USP22Q9UPT9 525 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 VDAC3Q9Y277 283 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 CABIN1Q9Y6J0 2220 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 C2orf92A0A1B0GVN3 265 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 RPLP0P05388 317 aaKnown RBP12.97□□□□□ -0.33
SMC6-201ENST00000351948 CD2P06729 351 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 SRFP11831 508 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 SLC6A6P31641 620 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 GCGRP47871 477 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 RCAN2Q14206 197 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 TSTQ16762 297 aaKnown RBP12.97□□□□□ -0.33
SMC6-201ENST00000351948 AFMIDQ63HM1 303 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 ZSWIM9Q86XI8 627 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 PIK3R3Q92569 461 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 DUSP23Q9BVJ7 150 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 TEX10Q9NXF1 929 aaPredicted RBP12.97□□□□□ -0.33
SMC6-201ENST00000351948 CER1O95813 267 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 HSD11B1P28845 292 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 OPRD1P41143 372 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 INHBCP55103 352 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 NADK2Q4G0N4 442 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 CHCHD4Q8N4Q1 142 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 OR2L8Q8NGY9 312 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 MGAT4BQ9UQ53 548 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 TAPBPO15533 448 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 CKMT1AP12532 417 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 GBX2P52951 348 aaPredicted RBP12.97□□□□□ -0.33
SMC6-201ENST00000351948 HBA1P69905 142 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 ALG10BQ5I7T1 473 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 MZT2BQ6NZ67 158 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 SLCO4C1Q6ZQN7 724 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.97□□□□□ -0.33
SMC6-201ENST00000351948 OR6N2Q8NGY6 317 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 OR8K3Q8NH51 312 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 CDS1Q92903 461 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 ADOQ96SZ5 270 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 CMKLR1Q99788 373 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 TMEM121BQ9BXQ6 578 aaPredicted RBP12.97□□□□□ -0.33
SMC6-201ENST00000351948 A0A1W2PPL8 197 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 H3BML4 177 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 NUDT7P0C024 238 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 OR1D5P58170 312 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 MYBPC3Q14896 1274 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 OR6C4Q8NGE1 309 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 OR52R1Q8NGF1 315 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 TMEM234Q8WY98 164 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 FAM46AQ96IP4 442 aaKnown RBP12.97□□□□□ -0.33
SMC6-201ENST00000351948 EPHA6Q9UF33 1036 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 NRXN2Q9P2S2 1712 aa12.97□□□□□ -0.33
SMC6-201ENST00000351948 TBX1O43435 398 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 PRAMEF2O60811 474 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 RLN1P04808 185 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 NUDT1P36639 197 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 RACK1P63244 317 aaKnown RBP12.96□□□□□ -0.33
SMC6-201ENST00000351948 GBX1Q14549 363 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 PPP1R3BQ86XI6 285 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 RCBTB1Q8NDN9 531 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 OR5L2Q8NGL0 311 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 MZB1Q8WU39 189 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 TMCO6Q96DC7 493 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 PELOQ9BRX2 385 aaKnown RBP12.96□□□□□ -0.33
SMC6-201ENST00000351948 H3BNX3 289 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 TPD52L2O43399 206 aaKnown RBP12.96□□□□□ -0.33
SMC6-201ENST00000351948 FESP07332 822 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 OR2B6P58173 313 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 C18orf63Q68DL7 685 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 SFTPA1Q8IWL2 248 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 NRMQ8IXM6 262 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 OR9Q2Q8NGE9 314 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 MSLNLQ96KJ4 702 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 LIN28AQ9H9Z2 209 aaKnown RBP12.96□□□□□ -0.33
SMC6-201ENST00000351948 ZNF304Q9HCX3 659 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 TRNAU1APQ9NX07 287 aaKnown RBP12.96□□□□□ -0.33
SMC6-201ENST00000351948 SLC39A1Q9NY26 324 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 EFCAB7A8K855 629 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 AIFM1O95831 613 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 CD27P26842 260 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 SFTPDP35247 375 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 SELPLGQ14242 412 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 SLC5A12Q1EHB4 618 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 Q6ZSR9 355 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 GALNTL5Q7Z4T8 443 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 OR51L1Q8NGJ5 315 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 ZNF707Q96C28 371 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms