RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3A, Length 2,235 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 TCEANCQ8N8B7 351 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 MND1Q9BWT6 205 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 CES1P1Q9UKY3 287 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 ENTPD4Q9Y227 616 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 TBX1O43435 398 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 GPX5O75715 221 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 STATHP02808 62 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 DUSP2Q05923 314 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 SPHARQ15513 63 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 STEAP3Q658P3 488 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 SLC48A1Q6P1K1 146 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 GDPGP1Q6ZNW5 385 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 YAF2Q8IY57 180 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 SRFBP1Q8NEF9 429 aaKnown RBP20.85■□□□□ 0.93
UPF3A-201ENST00000351487 FAM131CQ96AQ9 280 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 MACROD1Q9BQ69 325 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 PINK1Q9BXM7 581 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 PCDHGA4Q9Y5G9 962 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 MED26O95402 600 aa20.84■□□□□ 0.93
UPF3A-201ENST00000351487 TNNI3P19429 210 aa20.84■□□□□ 0.93
UPF3A-201ENST00000351487 PCYT1AP49585 367 aa20.84■□□□□ 0.93
UPF3A-201ENST00000351487 PRKAG1P54619 331 aa20.84■□□□□ 0.93
UPF3A-201ENST00000351487 ERVK-21P61565 698 aa20.84■□□□□ 0.93
UPF3A-201ENST00000351487 CEBPEQ15744 281 aa20.84■□□□□ 0.93
UPF3A-201ENST00000351487 ENTPD8Q5MY95 495 aa20.84■□□□□ 0.93
UPF3A-201ENST00000351487 OLIG3Q7RTU3 272 aa20.84■□□□□ 0.93
UPF3A-201ENST00000351487 OTUB1Q96FW1 271 aaPredicted RBP20.84■□□□□ 0.93
UPF3A-201ENST00000351487 TSSK6Q9BXA6 273 aa20.84■□□□□ 0.93
UPF3A-201ENST00000351487 CLEC2DQ9UHP7 191 aa20.84■□□□□ 0.93
UPF3A-201ENST00000351487 PDZK1P1A8MUH7 402 aa20.84■□□□□ 0.93
UPF3A-201ENST00000351487 RPE65Q16518 533 aa20.84■□□□□ 0.93
UPF3A-201ENST00000351487 ZNF425Q6IV72 752 aa20.84■□□□□ 0.93
UPF3A-201ENST00000351487 UBE2Q1Q7Z7E8 422 aa20.84■□□□□ 0.93
UPF3A-201ENST00000351487 SLC34A3Q8N130 599 aa20.84■□□□□ 0.93
UPF3A-201ENST00000351487 NANOGP1Q8N7R0 232 aa20.84■□□□□ 0.93
UPF3A-201ENST00000351487 MFSD9Q8NBP5 474 aa20.84■□□□□ 0.93
UPF3A-201ENST00000351487 PROKR2Q8NFJ6 384 aa20.84■□□□□ 0.93
UPF3A-201ENST00000351487 FGF11Q92914 225 aa20.84■□□□□ 0.93
UPF3A-201ENST00000351487 QPCTLQ9NXS2 382 aa20.84■□□□□ 0.93
UPF3A-201ENST00000351487 ZNF229Q9UJW7 825 aa20.84■□□□□ 0.93
UPF3A-201ENST00000351487 A0A075B6Q4 140 aa20.83■□□□□ 0.93
UPF3A-201ENST00000351487 GRXCR1A8MXD5 290 aa20.83■□□□□ 0.93
UPF3A-201ENST00000351487 SYT5O00445 386 aa20.83■□□□□ 0.93
UPF3A-201ENST00000351487 PLRG1O43660 514 aaKnown RBP20.83■□□□□ 0.93
UPF3A-201ENST00000351487 PRKYO43930 277 aa20.83■□□□□ 0.93
UPF3A-201ENST00000351487 F3P13726 295 aa20.83■□□□□ 0.93
UPF3A-201ENST00000351487 CERS1P27544 350 aa20.83■□□□□ 0.93
UPF3A-201ENST00000351487 PRR5P85299 388 aa20.83■□□□□ 0.93
UPF3A-201ENST00000351487 CDK5Q00535 292 aa20.83■□□□□ 0.93
UPF3A-201ENST00000351487 IQCHQ86VS3 1027 aa20.83■□□□□ 0.93
UPF3A-201ENST00000351487 TRIM69Q86WT6 500 aa20.83■□□□□ 0.93
UPF3A-201ENST00000351487 CCDC116Q8IYX3 515 aa20.83■□□□□ 0.93
UPF3A-201ENST00000351487 IQCF1Q8N6M8 205 aa20.83■□□□□ 0.93
UPF3A-201ENST00000351487 SCARF2Q96GP6 870 aaPredicted RBP20.83■□□□□ 0.93
UPF3A-201ENST00000351487 YIPF4Q9BSR8 244 aa20.83■□□□□ 0.93
UPF3A-201ENST00000351487 SLC17A9Q9BYT1 436 aa20.83■□□□□ 0.93
UPF3A-201ENST00000351487 DZANK1Q9NVP4 752 aa20.83■□□□□ 0.93
UPF3A-201ENST00000351487 SPHK1Q9NYA1 384 aa20.83■□□□□ 0.93
UPF3A-201ENST00000351487 GOLGA4Q13439 2230 aaKnown RBP20.83■□□□□ 0.92
UPF3A-201ENST00000351487 PNMA8CA0A1B0GUJ8 204 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 A0A1W2PQU0 124 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 SNX4O95219 450 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 ALPPL2P10696 532 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 CSNK2A2P19784 350 aaPredicted RBP20.82■□□□□ 0.92
UPF3A-201ENST00000351487 GSTM3P21266 225 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 PTGER1P34995 402 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 GIPRP48546 466 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 EFNB1P98172 346 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 SLC13A2Q13183 592 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 ZNF750Q32MQ0 723 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 C18orf63Q68DL7 685 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 TMEM107Q6UX40 140 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 NR4A3Q92570 626 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 TMEM106CQ9BVX2 250 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 KIR3DX1Q9H7L2 352 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 SYNPO2LQ9H987 977 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 FBXL12Q9NXK8 326 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 TVP23BQ9NYZ1 205 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 SEC14L4Q9UDX3 406 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 FBXW2Q9UKT8 454 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 GPSM3Q9Y4H4 160 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 EMC8O43402 210 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 ASNA1O43681 348 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 PTTG1O95997 202 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 CKMT1AP12532 417 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 CMPK1P30085 196 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 BUD31P41223 144 aaPredicted RBP20.82■□□□□ 0.92
UPF3A-201ENST00000351487 SOX3P41225 446 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 LRRC32Q14392 662 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 SYT14P1Q58G82 188 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 CCDC190Q86UF4 302 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 CLIP4Q8N3C7 705 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 GPA33Q99795 319 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 C1QTNF7Q9BXJ2 289 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 NDUFB11Q9NX14 153 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 DIMT1Q9UNQ2 313 aaKnown RBP20.82■□□□□ 0.92
UPF3A-201ENST00000351487 KLHL20Q9Y2M5 609 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 C5orf42Q9H799 3197 aa20.82■□□□□ 0.92
UPF3A-201ENST00000351487 PRR23AA6NEV1 266 aa20.81■□□□□ 0.92
UPF3A-201ENST00000351487 AQP9O43315 295 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms