RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 SH3GL2Q99962 352 aa20.4■□□□□ 0.86
SNX3-202ENST00000349379 PAIP2Q9BPZ3 127 aaKnown RBP20.4■□□□□ 0.86
SNX3-202ENST00000349379 VIPAS39Q9H9C1 493 aa20.4■□□□□ 0.86
SNX3-202ENST00000349379 PFDN4Q9NQP4 134 aa20.4■□□□□ 0.86
SNX3-202ENST00000349379 DEPPQ9NTK1 212 aa20.4■□□□□ 0.86
SNX3-202ENST00000349379 CFL2Q9Y281 166 aa20.4■□□□□ 0.86
SNX3-202ENST00000349379 DTX4Q9Y2E6 619 aa20.4■□□□□ 0.86
SNX3-202ENST00000349379 FLNCQ14315 2725 aa20.39■□□□□ 0.85
SNX3-202ENST00000349379 PEX11AO75192 247 aa20.39■□□□□ 0.85
SNX3-202ENST00000349379 SNNO75324 88 aaPredicted RBP20.39■□□□□ 0.85
SNX3-202ENST00000349379 MPIP34949 423 aa20.39■□□□□ 0.85
SNX3-202ENST00000349379 ASMTP46597 345 aa20.39■□□□□ 0.85
SNX3-202ENST00000349379 MEOX1P50221 254 aa20.39■□□□□ 0.85
SNX3-202ENST00000349379 EMDP50402 254 aa20.39■□□□□ 0.85
SNX3-202ENST00000349379 RPL14P50914 215 aaKnown RBP20.39■□□□□ 0.85
SNX3-202ENST00000349379 ATP6AP1LQ52LC2 224 aa20.39■□□□□ 0.85
SNX3-202ENST00000349379 FHL5Q5TD97 284 aa20.39■□□□□ 0.85
SNX3-202ENST00000349379 HDXQ7Z353 690 aa20.39■□□□□ 0.85
SNX3-202ENST00000349379 SIAH3Q8IW03 269 aa20.39■□□□□ 0.85
SNX3-202ENST00000349379 FAM9CQ8IZT9 166 aa20.39■□□□□ 0.85
SNX3-202ENST00000349379 OR52R1Q8NGF1 315 aa20.39■□□□□ 0.85
SNX3-202ENST00000349379 GLIPR2Q9H4G4 154 aa20.39■□□□□ 0.85
SNX3-202ENST00000349379 REEP4Q9H6H4 257 aa20.39■□□□□ 0.85
SNX3-202ENST00000349379 NKIRAS1Q9NYS0 192 aa20.39■□□□□ 0.85
SNX3-202ENST00000349379 NUP214P35658 2090 aaPredicted RBP20.39■□□□□ 0.85
SNX3-202ENST00000349379 NCKAP5O14513 1909 aa20.39■□□□□ 0.85
SNX3-202ENST00000349379 KLRC4-KLRK1H3BQV0 150 aa20.38■□□□□ 0.85
SNX3-202ENST00000349379 PEX1O43933 1283 aa20.38■□□□□ 0.85
SNX3-202ENST00000349379 PLOD3O60568 738 aa20.38■□□□□ 0.85
SNX3-202ENST00000349379 BCAS2O75934 225 aaPredicted RBP20.38■□□□□ 0.85
SNX3-202ENST00000349379 SLITRK5O94991 958 aa20.38■□□□□ 0.85
SNX3-202ENST00000349379 IFI6P09912 130 aa20.38■□□□□ 0.85
SNX3-202ENST00000349379 MAPK1P28482 360 aa20.38■□□□□ 0.85
SNX3-202ENST00000349379 NR0B1P51843 470 aaKnown RBP20.38■□□□□ 0.85
SNX3-202ENST00000349379 SRSF11Q05519 484 aaKnown RBP20.38■□□□□ 0.85
SNX3-202ENST00000349379 NTRK2Q16620 822 aa20.38■□□□□ 0.85
SNX3-202ENST00000349379 RNFT1Q5M7Z0 435 aa20.38■□□□□ 0.85
SNX3-202ENST00000349379 TAGAPQ8N103 731 aa20.38■□□□□ 0.85
SNX3-202ENST00000349379 ZFP62Q8NB50 900 aaPredicted RBP20.38■□□□□ 0.85
SNX3-202ENST00000349379 RAB3IL1Q8TBN0 382 aa20.38■□□□□ 0.85
SNX3-202ENST00000349379 MGARPQ8TDB4 240 aa20.38■□□□□ 0.85
SNX3-202ENST00000349379 KAT2AQ92830 837 aa20.38■□□□□ 0.85
SNX3-202ENST00000349379 ATP6V1G3Q96LB4 118 aa20.38■□□□□ 0.85
SNX3-202ENST00000349379 BBS4Q96RK4 519 aa20.38■□□□□ 0.85
SNX3-202ENST00000349379 ITPAQ9BY32 194 aa20.38■□□□□ 0.85
SNX3-202ENST00000349379 NXF5Q9H1B4 397 aaKnown RBP20.38■□□□□ 0.85
SNX3-202ENST00000349379 PRODH2Q9UF12 536 aa20.38■□□□□ 0.85
SNX3-202ENST00000349379 BCAP29Q9UHQ4 241 aa20.38■□□□□ 0.85
SNX3-202ENST00000349379 BAIAP2L1Q9UHR4 511 aa20.38■□□□□ 0.85
SNX3-202ENST00000349379 FLNBO75369 2602 aaKnown RBP20.38■□□□□ 0.85
SNX3-202ENST00000349379 WISP2O76076 250 aa20.37■□□□□ 0.85
SNX3-202ENST00000349379 FRKP42685 505 aaPredicted RBP20.37■□□□□ 0.85
SNX3-202ENST00000349379 GPR85P60893 370 aa20.37■□□□□ 0.85
SNX3-202ENST00000349379 ALDH6A1Q02252 535 aaKnown RBP20.37■□□□□ 0.85
SNX3-202ENST00000349379 PDCD2Q16342 344 aaPredicted RBP20.37■□□□□ 0.85
SNX3-202ENST00000349379 SMU1Q2TAY7 513 aa20.37■□□□□ 0.85
SNX3-202ENST00000349379 EIF2S3LQ2VIR3 472 aaKnown RBP20.37■□□□□ 0.85
SNX3-202ENST00000349379 ZNF385BQ569K4 471 aa20.37■□□□□ 0.85
SNX3-202ENST00000349379 TTMPQ5BVD1 217 aa20.37■□□□□ 0.85
SNX3-202ENST00000349379 HLA-DQA1Q5Y7H0 255 aa20.37■□□□□ 0.85
SNX3-202ENST00000349379 OR7G2Q8NG99 324 aa20.37■□□□□ 0.85
SNX3-202ENST00000349379 CLHC1Q8NHS4 586 aa20.37■□□□□ 0.85
SNX3-202ENST00000349379 PAQR8Q8TEZ7 354 aa20.37■□□□□ 0.85
SNX3-202ENST00000349379 GFM2Q969S9 779 aaKnown RBP20.37■□□□□ 0.85
SNX3-202ENST00000349379 TUBGCP3Q96CW5 907 aa20.37■□□□□ 0.85
SNX3-202ENST00000349379 MTERF3Q96E29 417 aa20.37■□□□□ 0.85
SNX3-202ENST00000349379 AMDHD1Q96NU7 426 aa20.37■□□□□ 0.85
SNX3-202ENST00000349379 DNAJC13O75165 2243 aa20.37■□□□□ 0.85
SNX3-202ENST00000349379 ZNF407Q9C0G0 2248 aa20.37■□□□□ 0.85
SNX3-202ENST00000349379 FREM3P0C091 2139 aa20.36■□□□□ 0.85
SNX3-202ENST00000349379 DOPEY2Q9Y3R5 2298 aa20.36■□□□□ 0.85
SNX3-202ENST00000349379 A0A087WV62 115 aa20.36■□□□□ 0.85
SNX3-202ENST00000349379 PLOD2O00469 737 aa20.36■□□□□ 0.85
SNX3-202ENST00000349379 LRATO95237 230 aa20.36■□□□□ 0.85
SNX3-202ENST00000349379 CCL3P10147 92 aa20.36■□□□□ 0.85
SNX3-202ENST00000349379 PRPS2P11908 318 aa20.36■□□□□ 0.85
SNX3-202ENST00000349379 NTSP30990 170 aa20.36■□□□□ 0.85
SNX3-202ENST00000349379 NCBP2P52298 156 aaKnown RBP eCLIP20.36■□□□□ 0.85
SNX3-202ENST00000349379 ELOAQ14241 798 aaKnown RBP20.36■□□□□ 0.85
SNX3-202ENST00000349379 LIX1Q8N485 282 aa20.36■□□□□ 0.85
SNX3-202ENST00000349379 FNDC5Q8NAU1 212 aa20.36■□□□□ 0.85
SNX3-202ENST00000349379 OR2M7Q8NG81 312 aa20.36■□□□□ 0.85
SNX3-202ENST00000349379 GPR137Q96N19 417 aa20.36■□□□□ 0.85
SNX3-202ENST00000349379 C1orf50Q9BV19 199 aa20.36■□□□□ 0.85
SNX3-202ENST00000349379 ANKRA2Q9H9E1 313 aa20.36■□□□□ 0.85
SNX3-202ENST00000349379 PNPOQ9NVS9 261 aa20.36■□□□□ 0.85
SNX3-202ENST00000349379 THAP1Q9NVV9 213 aa20.36■□□□□ 0.85
SNX3-202ENST00000349379 ASIC5Q9NY37 505 aa20.36■□□□□ 0.85
SNX3-202ENST00000349379 NPFFR2Q9Y5X5 522 aa20.36■□□□□ 0.85
SNX3-202ENST00000349379 CHCHD2Q9Y6H1 151 aaPredicted RBP20.36■□□□□ 0.85
SNX3-202ENST00000349379 A0A0G2JMM0 328 aa20.35■□□□□ 0.85
SNX3-202ENST00000349379 A0A1W2PPB8 328 aa20.35■□□□□ 0.85
SNX3-202ENST00000349379 A0A1W2PRS3 328 aa20.35■□□□□ 0.85
SNX3-202ENST00000349379 PINLYPA6NC86 204 aa20.35■□□□□ 0.85
SNX3-202ENST00000349379 KIR3DP1A8MWS1 328 aa20.35■□□□□ 0.85
SNX3-202ENST00000349379 AKAP10O43572 662 aa20.35■□□□□ 0.85
SNX3-202ENST00000349379 PSMG1O95456 288 aa20.35■□□□□ 0.85
SNX3-202ENST00000349379 ZNF24P17028 368 aa20.35■□□□□ 0.85
SNX3-202ENST00000349379 CNR1P21554 472 aa20.35■□□□□ 0.85
SNX3-202ENST00000349379 DRD5P21918 477 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms