RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 NTRK2Q16620 822 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 PLEKHS1Q5SXH7 462 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 GCNT6Q5T4J0 391 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 TMEM91Q6ZNR0 172 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 UBE2R2Q712K3 238 aaPredicted RBP9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 WDR53Q7Z5U6 358 aaPredicted RBP9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 NPAS3Q8IXF0 933 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 KLHDC8AQ8IYD2 350 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 TCEANCQ8N8B7 351 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 ADAMTS14Q8WXS8 1223 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 OTULINQ96BN8 352 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 SLC38A2Q96QD8 506 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 THAP7Q9BT49 309 aaPredicted RBP9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 POLDIP3Q9BY77 421 aaKnown RBP9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 NLNQ9BYT8 704 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 RERGLQ9H628 205 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 BRF2Q9HAW0 419 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 FGF20Q9NP95 211 aaPredicted RBP9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 CD93Q9NPY3 652 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 HCN3Q9P1Z3 774 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 COPZ2Q9P299 210 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 EXTL2Q9UBQ6 330 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 POMT2Q9UKY4 750 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 PRG3Q9Y2Y8 225 aaPredicted RBP9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 NUP214P35658 2090 aaPredicted RBP9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 TRAV6A0A075B6T7 132 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 ZNF840PA6NDX5 716 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 G3V3Q6 166 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 LANCL1O43813 399 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 MMP20O60882 483 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 TCRBP04435 133 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 CHRM5P08912 532 aaPredicted RBP9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 CYBAP13498 195 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 UGT2B7P16662 529 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 ELK1P19419 428 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 MAOBP27338 520 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 AOAHP28039 575 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 RFX3P48380 749 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 HOXA1P49639 335 aaPredicted RBP9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 XKP51811 444 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 ERVK-21P61565 698 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 DHODHQ02127 395 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 CSTF1Q05048 431 aaKnown RBP9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 BCL2L1Q07817 233 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 CRYZQ08257 329 aaKnown RBP9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 SCRN3Q0VDG4 424 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 MAP4K2Q12851 820 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 GANABQ14697 944 aaKnown RBP9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 RAET1GQ6H3X3 334 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 C3P1Q6ZMU1 363 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 TPGS1Q6ZTW0 290 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 LRRC28Q86X40 367 aaPredicted RBP9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 SLC30A8Q8IWU4 369 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 PIAS4Q8N2W9 510 aaPredicted RBP9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 CLDN19Q8N6F1 224 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 ARIH2OSQ8N7S6 290 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 CLRN3Q8NCR9 226 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 TTC16Q8NEE8 873 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 OR5T2Q8NGG2 359 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 ASB11Q8WXH4 323 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 RNF32Q9H0A6 362 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 SERHL2Q9H4I8 314 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 ELAC1Q9H777 363 aaKnown RBP9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 RC3H2Q9HBD1 1191 aaKnown RBP9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 CYSLTR2Q9NS75 346 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 SPATA6Q9NWH7 488 aaPredicted RBP9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 SLC39A1Q9NY26 324 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 EMC3Q9P0I2 261 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 VPS29Q9UBQ0 182 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 OR51B4Q9Y5P0 310 aa9.77□□□□□ -0.84
CHRNA1-202ENST00000348749 GABRR3A8MPY1 467 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 GFYI3L273 518 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 GPR39O43194 453 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 COCHO43405 550 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 PRAMEF12O95522 483 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 RECKO95980 971 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 KLKB1P03952 638 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 FGF2P09038 288 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 ALPIP09923 528 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 RBMS1P29558 406 aaKnown RBP9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 LCN1P31025 176 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 CRATP43155 626 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 PNLIPRP1P54315 467 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 C2orf80Q0P641 193 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 OPCMLQ14982 345 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 CHRNA6Q15825 494 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 MPPE1Q53F39 396 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 SYT14P1Q58G82 188 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 XKR6Q5GH73 641 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 SEZ6L2Q6UXD5 910 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 MBOAT1Q6ZNC8 495 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 ASB18Q6ZVZ8 466 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 USP45Q70EL2 814 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 BCDIN3DQ7Z5W3 292 aaKnown RBP9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 HJURPQ8NCD3 748 aaPredicted RBP9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 TRPV1Q8NER1 839 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 OR52N2Q8NGI0 321 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 OR5M3Q8NGP4 307 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 GOT1L1Q8NHS2 421 aaPredicted RBP9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 NFKBIDQ8NI38 313 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms