RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 PCOLCEQ15113 449 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 KIRREL2Q6UWL6 708 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 C16orf89Q6UX73 402 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 SZRD1Q7Z422 152 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 WDR53Q7Z5U6 358 aaPredicted RBP17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 OR52R1Q8NGF1 315 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 SLC2A12Q8TD20 617 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 ZNF721Q8TF20 911 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 NEURL3Q96EH8 262 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 SENP5Q96HI0 755 aaPredicted RBP17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 CLPTM1LQ96KA5 538 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 NUDT9Q9BW91 350 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 CADM1Q9BY67 442 aaKnown RBP17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 LRMDAQ9H2I8 198 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 DDX18Q9NVP1 670 aaKnown RBP17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 PTGFRNQ9P2B2 879 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 TMEM181Q9P2C4 612 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 ANGPTL2Q9UKU9 493 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 USP22Q9UPT9 525 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 PCDHGA6Q9Y5G7 932 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 SAGE2PA6NJ88 616 aa17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 MASP2O00187 686 aa17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 SORBS2O94875 1100 aaKnown RBP17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 WT1P19544 449 aaPredicted RBP17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 GPR143P51810 404 aa17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 PAPD4Q6PIY7 484 aaKnown RBP17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 RNF130Q86XS8 419 aa17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 TRIML2Q8N7C3 387 aa17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 ZNF615Q8N8J6 731 aa17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 OR14A16Q8NHC5 309 aa17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 OTUB1Q96FW1 271 aaPredicted RBP17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 CDRT15Q96T59 188 aa17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 YIPF4Q9BSR8 244 aa17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 OR8D2Q9GZM6 311 aa17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 GPN2Q9H9Y4 310 aaPredicted RBP17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 C3orf14Q9HBI5 128 aa17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 EQTNQ9NQ60 294 aa17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 ABCD2Q9UBJ2 740 aa17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 BCAP29Q9UHQ4 241 aa17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 GMEB1Q9Y692 573 aa17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 CLCA3PQ9Y6N3 262 aa17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 CACNA1BQ00975 2339 aa17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 ACACBO00763 2458 aa17.69■□□□□ 0.42
CHMP4A-201ENST00000347519 MAP1BP46821 2468 aaKnown RBP17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 ANKRD65E5RJM6 399 aa17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 GSC2O15499 205 aa17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 IGHEP01854 428 aa17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 IGKV3-11P04433 115 aa17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 HMGN2P05204 90 aaKnown RBP17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 IFI6P09912 130 aa17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 COX6A1P12074 109 aa17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 EMDP50402 254 aa17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 GZMMP51124 257 aa17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 SSPNQ14714 243 aa17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 LASP1Q14847 261 aaKnown RBP17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 RNF148Q8N7C7 305 aa17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 OR8J3Q8NGG0 315 aa17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 OR56A1Q8NGH5 318 aa17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 FBXO30Q8TB52 745 aa17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 NAF1Q96HR8 494 aaKnown RBP17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 FBXL20Q96IG2 436 aa17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 SLC35G5Q96KT7 338 aa17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 THUMPD3Q9BV44 507 aaKnown RBP17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 ZNF700Q9H0M5 742 aa17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 PIF1Q9H611 641 aa17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 WDR70Q9NW82 654 aa17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 ADA2Q9NZK5 511 aa17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 C19orf25Q9UFG5 118 aaPredicted RBP17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 ZNF223Q9UK11 482 aaPredicted RBP17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 DTX4Q9Y2E6 619 aa17.68■□□□□ 0.42
CHMP4A-201ENST00000347519 IGHV1-45A0A0A0MS14 117 aa17.67■□□□□ 0.42
CHMP4A-201ENST00000347519 SLITRK5O94991 958 aa17.67■□□□□ 0.42
CHMP4A-201ENST00000347519 NUDT7P0C024 238 aa17.67■□□□□ 0.42
CHMP4A-201ENST00000347519 ETFAP13804 333 aa17.67■□□□□ 0.42
CHMP4A-201ENST00000347519 PRR5P85299 388 aa17.67■□□□□ 0.42
CHMP4A-201ENST00000347519 CEACAM7Q14002 265 aa17.67■□□□□ 0.42
CHMP4A-201ENST00000347519 ANGPTL8Q6UXH0 198 aa17.67■□□□□ 0.42
CHMP4A-201ENST00000347519 BNC2Q6ZN30 1099 aaPredicted RBP17.67■□□□□ 0.42
CHMP4A-201ENST00000347519 ZNF771Q7L3S4 317 aaPredicted RBP17.67■□□□□ 0.42
CHMP4A-201ENST00000347519 HORMAD2Q8N7B1 307 aa17.67■□□□□ 0.42
CHMP4A-201ENST00000347519 C7orf57Q8NEG2 295 aa17.67■□□□□ 0.42
CHMP4A-201ENST00000347519 OR11G2Q8NGC1 345 aa17.67■□□□□ 0.42
CHMP4A-201ENST00000347519 OR52N2Q8NGI0 321 aa17.67■□□□□ 0.42
CHMP4A-201ENST00000347519 ADAMTS17Q8TE56 1095 aa17.67■□□□□ 0.42
CHMP4A-201ENST00000347519 DAZLQ92904 295 aaKnown RBP17.67■□□□□ 0.42
CHMP4A-201ENST00000347519 MOAP1Q96BY2 351 aa17.67■□□□□ 0.42
CHMP4A-201ENST00000347519 THTPAQ9BU02 230 aa17.67■□□□□ 0.42
CHMP4A-201ENST00000347519 OR10A5Q9H207 317 aa17.67■□□□□ 0.42
CHMP4A-201ENST00000347519 KAT8Q9H7Z6 458 aaKnown RBP17.67■□□□□ 0.42
CHMP4A-201ENST00000347519 NDE1Q9NXR1 346 aa17.67■□□□□ 0.42
CHMP4A-201ENST00000347519 KCND3Q9UK17 655 aa17.67■□□□□ 0.42
CHMP4A-201ENST00000347519 A0A1W2PQ72 361 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 SYNDIG1LA6NDD5 238 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 PRKNO60260 465 aaPredicted RBP17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 CREG1O75629 220 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 DNAJC8O75937 253 aaPredicted RBP17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 PDE5AO76074 875 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 KRT75O95678 551 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms