RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 RAB36O95755 333 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 C6orf47O95873 294 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 GGT1P19440 569 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 GDF1P27539 372 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 ARNTP27540 789 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 CLCN4P51793 760 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 ERVFC1P60507 584 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 ZNF33BQ06732 778 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 IL18Q14116 193 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 IQCHQ86VS3 1027 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 CLECL1Q8IZS7 167 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 ZFPM2Q8WW38 1151 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 ITPAQ9BY32 194 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 PLAC1Q9HBJ0 212 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 NUP205Q92621 2012 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 hCG_1807616A0A1W2PRN6 198 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 HIDE1A8MVS5 230 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 FPR1P21462 350 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 PPP2R2BQ00005 443 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 ST3GAL3Q11203 375 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 VWA2Q5GFL6 755 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 TPRG1LQ5T0D9 272 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 ASB18Q6ZVZ8 466 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 COL21A1Q96P44 957 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 GPRC5BQ9NZH0 403 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 RIMKLBQ9ULI2 386 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 EMC9Q9Y3B6 208 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 PRAMEF2O60811 474 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 PSIP1O75475 530 aaKnown RBP10.35□□□□□ -0.75
CLCN6-202ENST00000346436 SCRG1O75711 98 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 CSTAP01040 98 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 SRCP12931 536 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 SOX9P48436 509 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 ZFP69Q49AA0 526 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 CYBRD1Q53TN4 286 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 CLEC12AQ5QGZ9 265 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 C1orf94Q6P1W5 598 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 USP43Q70EL4 1123 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 LRRC25Q8N386 305 aaPredicted RBP10.35□□□□□ -0.75
CLCN6-202ENST00000346436 ZNF433Q8N7K0 673 aaPredicted RBP10.35□□□□□ -0.75
CLCN6-202ENST00000346436 OR8J3Q8NGG0 315 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 PCDHB14Q9Y5E9 798 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 HTR3EA5X5Y0 456 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 KLRC4-KLRK1H3BQV0 150 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 ZFAND5O76080 213 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 BCHEP06276 602 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 ZNF26P17031 533 aaPredicted RBP10.35□□□□□ -0.75
CLCN6-202ENST00000346436 CTHP32929 405 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 CCT3P49368 545 aaKnown RBP10.35□□□□□ -0.75
CLCN6-202ENST00000346436 IL10RAQ13651 578 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 C6orf183Q5T699 404 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 LIPJQ5W064 366 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 TMEM207Q6UWW9 146 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 RNF175Q8N4F7 328 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 ARRDC2Q8TBH0 407 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 KCNE4Q8WWG9 221 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 PBX4Q9BYU1 374 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 TCF7L1Q9HCS4 588 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 ZNF222Q9UK12 451 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 GPR45Q9Y5Y3 372 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 A0A1W2PPL8 197 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 PLSCR5A0PG75 271 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 SLC1A7O00341 560 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 FLRT2O43155 660 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 PPM1BO75688 479 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 PENKP01210 267 aaPredicted RBP10.35□□□□□ -0.75
CLCN6-202ENST00000346436 TP53P04637 393 aaPredicted RBP10.35□□□□□ -0.75
CLCN6-202ENST00000346436 SMIM18P0DKX4 95 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 GADD45AP24522 165 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 TMBIM6P55061 237 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 KIAA1614Q5VZ46 1190 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 ZBTB8BQ8NAP8 495 aaPredicted RBP10.35□□□□□ -0.75
CLCN6-202ENST00000346436 NT5C3BQ969T7 300 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 FKBP10Q96AY3 582 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 ARRDC3Q96B67 414 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 CD180Q99467 661 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 ACTR10Q9NZ32 417 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 CAMK2AQ9UQM7 478 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 PHIPQ8WWQ0 1821 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 BTBD17A6NE02 478 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 TEX46H3BTG2 121 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 PTHP01270 115 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 POU3F2P20265 443 aaPredicted RBP10.35□□□□□ -0.75
CLCN6-202ENST00000346436 GGT2P36268 569 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 VASPP50552 380 aaPredicted RBP10.35□□□□□ -0.75
CLCN6-202ENST00000346436 TSPAN5P62079 268 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 CSNK2A1P68400 391 aaPredicted RBP10.35□□□□□ -0.75
CLCN6-202ENST00000346436 RBMS3Q6XE24 437 aaKnown RBP10.35□□□□□ -0.75
CLCN6-202ENST00000346436 AQP11Q8NBQ7 271 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 OMA1Q96E52 524 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 CITED4Q96RK1 184 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 TIMM29Q9BSF4 260 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 SLC46A2Q9BY10 475 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 POLR2J2Q9GZM3 115 aaKnown RBP10.35□□□□□ -0.75
CLCN6-202ENST00000346436 ARRDC1-AS1Q9H2J1 176 aa10.35□□□□□ -0.75
CLCN6-202ENST00000346436 A0A1B0GVT2 93 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 TRBC2A0A5B9 178 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 ZNF670-ZNF695F2Z2N8 137 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 PLK4O00444 970 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 LSM1O15116 133 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms