RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 SUN3Q8TAQ9 357 aa12.85□□□□□ -0.35
TPM4-202ENST00000344824 THAP3Q8WTV1 239 aaPredicted RBP12.85□□□□□ -0.35
TPM4-202ENST00000344824 CIDECQ96AQ7 238 aaPredicted RBP12.85□□□□□ -0.35
TPM4-202ENST00000344824 TESCQ96BS2 214 aa12.85□□□□□ -0.35
TPM4-202ENST00000344824 SNRNP40Q96DI7 357 aaKnown RBP12.85□□□□□ -0.35
TPM4-202ENST00000344824 ZNF354BQ96LW1 612 aa12.85□□□□□ -0.35
TPM4-202ENST00000344824 OR52E6Q96RD3 313 aa12.85□□□□□ -0.35
TPM4-202ENST00000344824 LMF1Q96S06 567 aa12.85□□□□□ -0.35
TPM4-202ENST00000344824 PRPF18Q99633 342 aaKnown RBP12.85□□□□□ -0.35
TPM4-202ENST00000344824 DUSP26Q9BV47 211 aa12.85□□□□□ -0.35
TPM4-202ENST00000344824 WDR41Q9HAD4 459 aa12.85□□□□□ -0.35
TPM4-202ENST00000344824 IL1RL2Q9HB29 575 aa12.85□□□□□ -0.35
TPM4-202ENST00000344824 LYRM4Q9HD34 91 aa12.85□□□□□ -0.35
TPM4-202ENST00000344824 MMP25Q9NPA2 562 aa12.85□□□□□ -0.35
TPM4-202ENST00000344824 KCMF1Q9P0J7 381 aa12.85□□□□□ -0.35
TPM4-202ENST00000344824 ATP6V1HQ9UI12 483 aa12.85□□□□□ -0.35
TPM4-202ENST00000344824 MAPRE3Q9UPY8 281 aa12.85□□□□□ -0.35
TPM4-202ENST00000344824 PCDHA9Q9Y5H5 950 aa12.85□□□□□ -0.35
TPM4-202ENST00000344824 TRBV11-1A0A0K0K1C0 115 aa12.84□□□□□ -0.35
TPM4-202ENST00000344824 ASPDHA6ND91 283 aa12.84□□□□□ -0.35
TPM4-202ENST00000344824 CYR61O00622 381 aa12.84□□□□□ -0.35
TPM4-202ENST00000344824 FBP2O00757 339 aa12.84□□□□□ -0.35
TPM4-202ENST00000344824 MRASO14807 208 aa12.84□□□□□ -0.35
TPM4-202ENST00000344824 CFLARO15519 480 aa12.84□□□□□ -0.35
TPM4-202ENST00000344824 ERAL1O75616 437 aaKnown RBP12.84□□□□□ -0.35
TPM4-202ENST00000344824 IL6P05231 212 aa12.84□□□□□ -0.35
TPM4-202ENST00000344824 PGRP06401 933 aa12.84□□□□□ -0.35
TPM4-202ENST00000344824 PCSK2P16519 638 aa12.84□□□□□ -0.35
TPM4-202ENST00000344824 TNNI3P19429 210 aa12.84□□□□□ -0.35
TPM4-202ENST00000344824 CALB2P22676 271 aa12.84□□□□□ -0.35
TPM4-202ENST00000344824 TLX1P31314 330 aaPredicted RBP12.84□□□□□ -0.35
TPM4-202ENST00000344824 RPL3P39023 403 aaKnown RBP12.84□□□□□ -0.35
TPM4-202ENST00000344824 KIR3DL1P43629 444 aa12.84□□□□□ -0.35
TPM4-202ENST00000344824 NUDT2P50583 147 aa12.84□□□□□ -0.35
TPM4-202ENST00000344824 PHC1P78364 1004 aa12.84□□□□□ -0.35
TPM4-202ENST00000344824 OC90Q02509 493 aaPredicted RBP12.84□□□□□ -0.35
TPM4-202ENST00000344824 SRSF11Q05519 484 aaKnown RBP12.84□□□□□ -0.35
TPM4-202ENST00000344824 MEP1AQ16819 746 aa12.84□□□□□ -0.35
TPM4-202ENST00000344824 ACER2Q5QJU3 275 aa12.84□□□□□ -0.35
TPM4-202ENST00000344824 NCLNQ969V3 563 aa12.84□□□□□ -0.35
TPM4-202ENST00000344824 KLHL29Q96CT2 875 aa12.84□□□□□ -0.35
TPM4-202ENST00000344824 DEFB126Q9BYW3 111 aa12.84□□□□□ -0.35
TPM4-202ENST00000344824 STMN3Q9NZ72 180 aa12.84□□□□□ -0.35
TPM4-202ENST00000344824 UTS2RQ9UKP6 389 aa12.84□□□□□ -0.35
TPM4-202ENST00000344824 WBP11Q9Y2W2 641 aaKnown RBP12.84□□□□□ -0.35
TPM4-202ENST00000344824 NDUFAF1Q9Y375 327 aa12.84□□□□□ -0.35
TPM4-202ENST00000344824 RELNP78509 3460 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 LRRK2Q5S007 2527 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 TRAV17A0A0B4J275 112 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 A0A1W2PP18 115 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 C1orf226A1L170 272 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 OR5H15A6NDH6 313 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 B2RBV5 119 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 MAN1A2O60476 641 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 CPSF4O95639 269 aaKnown RBP12.83□□□□□ -0.36
TPM4-202ENST00000344824 DRD2P14416 443 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 TNFSF10P50591 281 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 C21orf58P58505 322 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 STX5Q13190 355 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 PDE7AQ13946 482 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 DPY19L1Q2PZI1 675 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 PAGE3Q5JUK9 113 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 C6orf10Q5SRN2 563 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 FAM180AQ6UWF9 173 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 DNAJC14Q6Y2X3 702 aaPredicted RBP12.83□□□□□ -0.36
TPM4-202ENST00000344824 RINLQ6ZS11 566 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 RETREG3Q86VR2 466 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 OR4N5Q8IXE1 308 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 FBXO27Q8NI29 283 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 ALOXE3Q9BYJ1 711 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 CDCP1Q9H5V8 836 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 RPF2Q9H7B2 306 aaKnown RBP12.83□□□□□ -0.36
TPM4-202ENST00000344824 ADAP2Q9NPF8 381 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 SLC52A3Q9NQ40 469 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 ATAD3AQ9NVI7 634 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 TMEM45AQ9NWC5 275 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 MS4A12Q9NXJ0 267 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 LEF1Q9UJU2 399 aaPredicted RBP12.83□□□□□ -0.36
TPM4-202ENST00000344824 NTNG1Q9Y2I2 539 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 CLCA3PQ9Y6N3 262 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 HIVEP3Q5T1R4 2406 aa12.83□□□□□ -0.36
TPM4-202ENST00000344824 NUP214P35658 2090 aaPredicted RBP12.83□□□□□ -0.36
TPM4-202ENST00000344824 EML6Q6ZMW3 1958 aa12.82□□□□□ -0.36
TPM4-202ENST00000344824 BBIP1A8MTZ0 92 aa12.82□□□□□ -0.36
TPM4-202ENST00000344824 PDPK1O15530 556 aa12.82□□□□□ -0.36
TPM4-202ENST00000344824 FGF17O60258 216 aa12.82□□□□□ -0.36
TPM4-202ENST00000344824 CTNSO60931 367 aa12.82□□□□□ -0.36
TPM4-202ENST00000344824 UNC5CO95185 931 aa12.82□□□□□ -0.36
TPM4-202ENST00000344824 CLCN2P51788 898 aa12.82□□□□□ -0.36
TPM4-202ENST00000344824 WNT3P56703 355 aa12.82□□□□□ -0.36
TPM4-202ENST00000344824 MRPL49Q13405 166 aaKnown RBP12.82□□□□□ -0.36
TPM4-202ENST00000344824 ART3Q13508 389 aa12.82□□□□□ -0.36
TPM4-202ENST00000344824 NFYCQ13952 458 aa12.82□□□□□ -0.36
TPM4-202ENST00000344824 MAPKAPK3Q16644 382 aa12.82□□□□□ -0.36
TPM4-202ENST00000344824 MPEG1Q2M385 716 aa12.82□□□□□ -0.36
TPM4-202ENST00000344824 ZNF750Q32MQ0 723 aa12.82□□□□□ -0.36
TPM4-202ENST00000344824 OR52E8Q6IFG1 317 aa12.82□□□□□ -0.36
TPM4-202ENST00000344824 SLC48A1Q6P1K1 146 aa12.82□□□□□ -0.36
TPM4-202ENST00000344824 CLECL1Q8IZS7 167 aa12.82□□□□□ -0.36
TPM4-202ENST00000344824 GALNT11Q8NCW6 608 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms