RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 ACSM3Q53FZ2 586 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 SSX9Q7RTT3 188 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 GPR37L1O60883 481 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 RFPL3O75679 317 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 CELP19835 753 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 SULF2Q8IWU5 870 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 NIPSNAP3BQ9BS92 247 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 UNC13CQ8NB66 2214 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 DOCK11Q5JSL3 2073 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 UNC119BA6NIH7 251 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 ZNF736B4DX44 427 aaPredicted RBP16.89■□□□□ 0.29
SMAD4-201ENST00000342988 FMO6PO60774 539 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 ZNF8P17098 575 aaPredicted RBP16.89■□□□□ 0.29
SMAD4-201ENST00000342988 POU6F2P78424 691 aaPredicted RBP16.89■□□□□ 0.29
SMAD4-201ENST00000342988 FAM69AQ5T7M9 428 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 DCBLD1Q8N8Z6 715 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 TMEM185AQ8NFB2 350 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 OR2A12Q8NGT7 310 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 CDH20Q9HBT6 801 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 CUTCQ9NTM9 273 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 PCDHB10Q9UN67 800 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 CHD1O14646 1710 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 OR2T1O43869 369 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 HOXD11P31277 338 aaPredicted RBP16.89■□□□□ 0.29
SMAD4-201ENST00000342988 TAF10Q12962 218 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 UBXN2BQ14CS0 331 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 PLPPR4Q7Z2D5 763 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 SAT2Q96F10 170 aaPredicted RBP16.89■□□□□ 0.29
SMAD4-201ENST00000342988 NUBP2Q9Y5Y2 271 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 YDJCA8MPS7 323 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 SLC22A5O76082 557 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 PABPC4LP0CB38 370 aaKnown RBP16.89■□□□□ 0.29
SMAD4-201ENST00000342988 PRKACBP22694 351 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 RFC2P35250 354 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 OR5AK3PQ8NH89 298 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 LRRN4Q8WUT4 740 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 CHFRQ96EP1 664 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 AMDHD1Q96NU7 426 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 NELL2Q99435 816 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 ARPC5O15511 151 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 MAT2AP31153 395 aaKnown RBP16.89■□□□□ 0.29
SMAD4-201ENST00000342988 CYP27C1Q4G0S4 372 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 OR5L2Q8NGL0 311 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 ELMOD3Q96FG2 381 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 DHRS9Q9BPW9 319 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 PLA2R1Q13018 1463 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 MADDQ8WXG6 1647 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 CREG1O75629 220 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 HEXAP06865 529 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 CD53P19397 219 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 DNAJB1P25685 340 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 SHMT1P34896 483 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 RPL7AP62424 266 aaKnown RBP16.89■□□□□ 0.29
SMAD4-201ENST00000342988 ZNF425Q6IV72 752 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 ABHD11Q8NFV4 315 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 FRS2Q8WU20 508 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 HSH2DQ96JZ2 352 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 MYO16Q9Y6X6 1858 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 HTR3BO95264 441 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 UBE2KP61086 200 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 KDF1Q8NAX2 398 aaPredicted RBP16.89■□□□□ 0.29
SMAD4-201ENST00000342988 OR13C9Q8NGT0 318 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 KCTD13Q8WZ19 329 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 OCSTAMPQ9BR26 566 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 CD300AQ9UGN4 299 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 LIPT1Q9Y234 373 aa16.89■□□□□ 0.29
SMAD4-201ENST00000342988 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.89■□□□□ 0.29
SMAD4-201ENST00000342988 FABP1P07148 127 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 EFNA1P20827 205 aaPredicted RBP16.88■□□□□ 0.29
SMAD4-201ENST00000342988 ZNF585AQ6P3V2 769 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 OR4K14Q8NGD5 310 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 DAZLQ92904 295 aaKnown RBP16.88■□□□□ 0.29
SMAD4-201ENST00000342988 CARS2Q9HA77 564 aaKnown RBP16.88■□□□□ 0.29
SMAD4-201ENST00000342988 PLEK2Q9NYT0 353 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 ZFP37Q9Y6Q3 630 aaPredicted RBP16.88■□□□□ 0.29
SMAD4-201ENST00000342988 FUOMA2VDF0 154 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 TMEM63AO94886 807 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 UGT2B7P16662 529 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 FXYD4P59646 89 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 KIAA1211LQ6NV74 962 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 AADACL2Q6P093 401 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 ENPP7Q6UWV6 458 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 KBTBD6Q86V97 674 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 OR51G2Q8NGK0 314 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 BIRC8Q96P09 236 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 ADAMTS10Q9H324 1103 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 RPF2Q9H7B2 306 aaKnown RBP16.88■□□□□ 0.29
SMAD4-201ENST00000342988 SLC31A2O15432 143 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 FUT4P22083 530 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 MEP1BQ16820 701 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 KHDC1Q4VXA5 237 aaKnown RBP16.88■□□□□ 0.29
SMAD4-201ENST00000342988 RAET1LQ5VY80 246 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 SLC30A7Q8NEW0 376 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 NUDT9Q9BW91 350 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 NDRG2Q9UN36 371 aaKnown RBP16.88■□□□□ 0.29
SMAD4-201ENST00000342988 SLC6A14Q9UN76 642 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 MAGI2Q86UL8 1455 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 MRPL3P09001 348 aaKnown RBP16.88■□□□□ 0.29
SMAD4-201ENST00000342988 NFATC2Q13469 925 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 LYRM7Q5U5X0 104 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms