RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 TMEM35AQ53FP2 167 aa14.79□□□□□ -0.04
NECTIN1-202ENST00000340882 HP1BP3Q5SSJ5 553 aaPredicted RBP14.79□□□□□ -0.04
NECTIN1-202ENST00000340882 KHDRBS2Q5VWX1 349 aaKnown RBP14.79□□□□□ -0.04
NECTIN1-202ENST00000340882 ENPP6Q6UWR7 440 aa14.79□□□□□ -0.04
NECTIN1-202ENST00000340882 ZNF704Q6ZNC4 412 aaPredicted RBP14.79□□□□□ -0.04
NECTIN1-202ENST00000340882 TXLNBQ8N3L3 684 aa14.79□□□□□ -0.04
NECTIN1-202ENST00000340882 ZNF610Q8N9Z0 462 aa14.79□□□□□ -0.04
NECTIN1-202ENST00000340882 C7orf57Q8NEG2 295 aa14.79□□□□□ -0.04
NECTIN1-202ENST00000340882 EFCAB11Q9BUY7 163 aa14.79□□□□□ -0.04
NECTIN1-202ENST00000340882 NXF5Q9H1B4 397 aaKnown RBP14.79□□□□□ -0.04
NECTIN1-202ENST00000340882 CXorf56Q9H5V9 222 aa14.79□□□□□ -0.04
NECTIN1-202ENST00000340882 CXorf21Q9HAI6 301 aa14.79□□□□□ -0.04
NECTIN1-202ENST00000340882 RYDENQ9NUL5 291 aaKnown RBP14.79□□□□□ -0.04
NECTIN1-202ENST00000340882 CORO1CQ9ULV4 474 aaPredicted RBP14.79□□□□□ -0.04
NECTIN1-202ENST00000340882 A0A1W2PR48 441 aa14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 B4DXG7 233 aa14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 PLPP1O14494 284 aa14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 WIPF1O43516 503 aa14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 TLX2O43763 284 aaPredicted RBP14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 PCNAP12004 261 aa14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 TCEA1P23193 301 aaKnown RBP14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 TMED10P49755 219 aaKnown RBP14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 RPS13P62277 151 aaKnown RBP14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 EEF1A1P68104 462 aaKnown RBP14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 SRSF2Q01130 221 aaKnown RBP14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 PDK4Q16654 411 aa14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 CHRFAM7AQ494W8 412 aa14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 DEPDC1Q5TB30 811 aa14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 RNASEH2BQ5TBB1 312 aaKnown RBP14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 EEF1A1P5Q5VTE0 462 aa14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 HLA-DQA1Q5Y7H0 255 aa14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 SH2D5Q6ZV89 423 aa14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 ADAMTSL2Q86TH1 951 aa14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 FIG4Q92562 907 aa14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 MAGOHBQ96A72 148 aaKnown RBP14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 OSBPL11Q9BXB4 747 aa14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 ZNF717Q9BY31 904 aaPredicted RBP14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 MS4A12Q9NXJ0 267 aa14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 ELOVL5Q9NYP7 299 aa14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 EXO1Q9UQ84 846 aaKnown RBP14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 ASB4Q9Y574 426 aa14.78□□□□□ -0.04
NECTIN1-202ENST00000340882 FAM95CA0A1B0GW59 222 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 TMPRSS11DO60235 418 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 EEDO75530 441 aaKnown RBP14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 PPM1BO75688 479 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 STK16O75716 305 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 TTC4O95801 387 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 TP53P04637 393 aaPredicted RBP14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 SLC35E2BP0CK96 405 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 SLC35E2P0CK97 266 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 GPX3P22352 226 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 CNTFP26441 200 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 GALNSP34059 522 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 CLDN15P56746 228 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 RPP38P78345 283 aaKnown RBP14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 IRF8Q02556 426 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 E2F2Q14209 437 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 MRM1Q6IN84 353 aaKnown RBP14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 SLC30A6Q6NXT4 461 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 P4HA3Q7Z4N8 544 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 IFNEQ86WN2 208 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 PPIL6Q8IXY8 311 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 LAS2Q8IYD9 372 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 ZNF611Q8N823 705 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 OR7G3Q8NG95 312 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 PELOQ9BRX2 385 aaKnown RBP14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 KLHL4Q9C0H6 718 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 RBSNQ9H1K0 784 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 OR10A5Q9H207 317 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 ACTR8Q9H981 624 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 TAS2R10Q9NYW0 307 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 EHD3Q9NZN3 535 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 PHF11Q9UIL8 331 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 FBXL2Q9UKC9 423 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 RNF112Q9ULX5 631 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 LAMP3Q9UQV4 416 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 DLGAP4Q9Y2H0 992 aa14.77□□□□□ -0.05
NECTIN1-202ENST00000340882 SVEP1Q4LDE5 3571 aa14.76□□□□□ -0.05
NECTIN1-202ENST00000340882 FRG2CA6NGY1 282 aa14.76□□□□□ -0.05
NECTIN1-202ENST00000340882 C17orf51A8MQB3 221 aa14.76□□□□□ -0.05
NECTIN1-202ENST00000340882 H0YC42 278 aa14.76□□□□□ -0.05
NECTIN1-202ENST00000340882 HS3ST1O14792 307 aa14.76□□□□□ -0.05
NECTIN1-202ENST00000340882 PGRMC2O15173 223 aa14.76□□□□□ -0.05
NECTIN1-202ENST00000340882 CBR3O75828 277 aa14.76□□□□□ -0.05
NECTIN1-202ENST00000340882 CRHP06850 196 aa14.76□□□□□ -0.05
NECTIN1-202ENST00000340882 S1PR1P21453 382 aa14.76□□□□□ -0.05
NECTIN1-202ENST00000340882 GCKP35557 465 aa14.76□□□□□ -0.05
NECTIN1-202ENST00000340882 ACVR1BP36896 505 aa14.76□□□□□ -0.05
NECTIN1-202ENST00000340882 KCNJ5P48544 419 aa14.76□□□□□ -0.05
NECTIN1-202ENST00000340882 TPD52P55327 224 aaPredicted RBP14.76□□□□□ -0.05
NECTIN1-202ENST00000340882 NRG3P56975 720 aa14.76□□□□□ -0.05
NECTIN1-202ENST00000340882 LAPTM5Q13571 262 aa14.76□□□□□ -0.05
NECTIN1-202ENST00000340882 OR4D1Q15615 310 aa14.76□□□□□ -0.05
NECTIN1-202ENST00000340882 TBCCQ15814 346 aa14.76□□□□□ -0.05
NECTIN1-202ENST00000340882 HIST2H2ACQ16777 129 aaPredicted RBP14.76□□□□□ -0.05
NECTIN1-202ENST00000340882 PAGE2BQ5JRK9 111 aa14.76□□□□□ -0.05
NECTIN1-202ENST00000340882 HIST2H2AA3Q6FI13 130 aa14.76□□□□□ -0.05
NECTIN1-202ENST00000340882 TMEM81Q6P7N7 255 aa14.76□□□□□ -0.05
NECTIN1-202ENST00000340882 ZC3HC1Q86WB0 502 aaKnown RBP14.76□□□□□ -0.05
NECTIN1-202ENST00000340882 GPSM1Q86YR5 675 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms