RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 DUSP8Q13202 625 aa6.71□□□□□ -1.33
NUP43-201ENST00000340413 ZNHIT3Q15649 155 aaPredicted RBP6.71□□□□□ -1.33
NUP43-201ENST00000340413 MLIPQ5VWP3 458 aa6.71□□□□□ -1.33
NUP43-201ENST00000340413 SHQ1Q6PI26 577 aaKnown RBP6.71□□□□□ -1.33
NUP43-201ENST00000340413 TMEM205Q6UW68 189 aa6.71□□□□□ -1.33
NUP43-201ENST00000340413 ZNF551Q7Z340 670 aaPredicted RBP6.71□□□□□ -1.33
NUP43-201ENST00000340413 NUP54Q7Z3B4 507 aa6.71□□□□□ -1.33
NUP43-201ENST00000340413 APLFQ8IW19 511 aaPredicted RBP6.71□□□□□ -1.33
NUP43-201ENST00000340413 PIK3C3Q8NEB9 887 aa6.71□□□□□ -1.33
NUP43-201ENST00000340413 ZCCHC10Q8TBK6 192 aa6.71□□□□□ -1.33
NUP43-201ENST00000340413 APOBEC4Q8WW27 367 aaKnown RBP6.71□□□□□ -1.33
NUP43-201ENST00000340413 DAZLQ92904 295 aaKnown RBP6.71□□□□□ -1.33
NUP43-201ENST00000340413 HSPBAP1Q96EW2 488 aa6.71□□□□□ -1.33
NUP43-201ENST00000340413 ZNF597Q96LX8 424 aa6.71□□□□□ -1.33
NUP43-201ENST00000340413 SLC39A3Q9BRY0 314 aa6.71□□□□□ -1.33
NUP43-201ENST00000340413 YTHDF1Q9BYJ9 559 aaKnown RBP6.71□□□□□ -1.33
NUP43-201ENST00000340413 HSPE1-MOB4S4R3N1 261 aa6.71□□□□□ -1.33
NUP43-201ENST00000340413 SNRNP200O75643 2136 aaKnown RBP6.71□□□□□ -1.34
NUP43-201ENST00000340413 CDX4O14627 284 aaPredicted RBP6.71□□□□□ -1.34
NUP43-201ENST00000340413 FABP3P05413 133 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 DBIP07108 87 aaKnown RBP6.71□□□□□ -1.34
NUP43-201ENST00000340413 S1PR1P21453 382 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 KCNJ5P48544 419 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 DLX5P56178 289 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 DCDP81605 110 aaKnown RBP6.71□□□□□ -1.34
NUP43-201ENST00000340413 SHC2P98077 582 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 GTDC1Q4AE62 458 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 CYBRD1Q53TN4 286 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 CYP4Z1Q86W10 505 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 RNF130Q86XS8 419 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 CDC26Q8NHZ8 85 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 GFM2Q969S9 779 aaKnown RBP6.71□□□□□ -1.34
NUP43-201ENST00000340413 ZNF354BQ96LW1 612 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 OR7D2Q96RA2 312 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 NR1H4Q96RI1 486 aaPredicted RBP6.71□□□□□ -1.34
NUP43-201ENST00000340413 TAAR9Q96RI9 348 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 SPRTNQ9H040 489 aaPredicted RBP6.71□□□□□ -1.34
NUP43-201ENST00000340413 C12orf10Q9HB07 376 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 PRM3Q9NNZ6 103 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 RXFP3Q9NSD7 469 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 MRPS2Q9Y399 296 aaKnown RBP6.71□□□□□ -1.34
NUP43-201ENST00000340413 CCDC187A0A096LP49 1063 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 A0A1W2PQD3 144 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 LNP1A1A4G5 178 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 FRG2CA6NGY1 282 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.71□□□□□ -1.34
NUP43-201ENST00000340413 ANKRD65E5RJM6 399 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 E9PQ18 207 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 UPK1AO00322 258 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 FGF17O60258 216 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 KIAA0513O60268 411 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 BRINP1O60477 761 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 RDH16O75452 317 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 FOLR1P15328 257 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 RHCEP18577 417 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 SOAT1P35610 550 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 CRATP43155 626 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 LIN52Q52LA3 116 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 MRPL14Q6P1L8 145 aaKnown RBP6.71□□□□□ -1.34
NUP43-201ENST00000340413 ZNF605Q86T29 641 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 SPPL2CQ8IUH8 684 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 VWA5B2Q8N398 1253 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 OR9A4Q8NGU2 314 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 SPPL2AQ8TCT8 520 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 CCDC124Q96CT7 223 aaKnown RBP6.71□□□□□ -1.34
NUP43-201ENST00000340413 ZNF184Q99676 751 aaPredicted RBP6.71□□□□□ -1.34
NUP43-201ENST00000340413 NUDT22Q9BRQ3 303 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 OSBPL11Q9BXB4 747 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 OR51I1Q9H343 314 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 EXOSC3Q9NQT5 275 aaKnown RBP6.71□□□□□ -1.34
NUP43-201ENST00000340413 KLHL20Q9Y2M5 609 aa6.71□□□□□ -1.34
NUP43-201ENST00000340413 SGK494L7N484 410 aa6.7□□□□□ -1.34
NUP43-201ENST00000340413 MFN2O95140 757 aa6.7□□□□□ -1.34
NUP43-201ENST00000340413 FPR1P21462 350 aa6.7□□□□□ -1.34
NUP43-201ENST00000340413 SDHBP21912 280 aa6.7□□□□□ -1.34
NUP43-201ENST00000340413 ZNF141Q15928 474 aa6.7□□□□□ -1.34
NUP43-201ENST00000340413 NRF1Q16656 503 aa6.7□□□□□ -1.34
NUP43-201ENST00000340413 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.7□□□□□ -1.34
NUP43-201ENST00000340413 ANKRD26P1Q6NSI1 321 aa6.7□□□□□ -1.34
NUP43-201ENST00000340413 COX15Q7KZN9 410 aa6.7□□□□□ -1.34
NUP43-201ENST00000340413 SFTPA2Q8IWL1 248 aa6.7□□□□□ -1.34
NUP43-201ENST00000340413 FAM20CQ8IXL6 584 aa6.7□□□□□ -1.34
NUP43-201ENST00000340413 GPALPP1Q8IXQ4 340 aa6.7□□□□□ -1.34
NUP43-201ENST00000340413 HORMAD2Q8N7B1 307 aa6.7□□□□□ -1.34
NUP43-201ENST00000340413 WDR36Q8NI36 951 aaKnown RBP6.7□□□□□ -1.34
NUP43-201ENST00000340413 NUBPLQ8TB37 319 aa6.7□□□□□ -1.34
NUP43-201ENST00000340413 NETO1Q8TDF5 533 aa6.7□□□□□ -1.34
NUP43-201ENST00000340413 RNF138Q8WVD3 245 aa6.7□□□□□ -1.34
NUP43-201ENST00000340413 CANT1Q8WVQ1 401 aa6.7□□□□□ -1.34
NUP43-201ENST00000340413 IP6K3Q96PC2 410 aa6.7□□□□□ -1.34
NUP43-201ENST00000340413 CSF3RQ99062 836 aa6.7□□□□□ -1.34
NUP43-201ENST00000340413 DDX18Q9NVP1 670 aaKnown RBP6.7□□□□□ -1.34
NUP43-201ENST00000340413 NKX1-2Q9UD57 310 aaPredicted RBP6.7□□□□□ -1.34
NUP43-201ENST00000340413 C15orf41Q9Y2V0 281 aa6.7□□□□□ -1.34
NUP43-201ENST00000340413 SH3BP5O60239 455 aa6.7□□□□□ -1.34
NUP43-201ENST00000340413 SERPINA1P01009 418 aa6.7□□□□□ -1.34
NUP43-201ENST00000340413 ATP6V1C1P21283 382 aa6.7□□□□□ -1.34
NUP43-201ENST00000340413 DNAJA1P31689 397 aaKnown RBP6.7□□□□□ -1.34
NUP43-201ENST00000340413 PPICP45877 212 aa6.7□□□□□ -1.34
NUP43-201ENST00000340413 KCNJ10P78508 379 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms