RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 COPS7AQ9UBW8 275 aa16.65■□□□□ 0.26
SDCBP2-201ENST00000339987 FBXL4Q9UKA2 621 aa16.65■□□□□ 0.26
SDCBP2-201ENST00000339987 NUP214P35658 2090 aaPredicted RBP16.65■□□□□ 0.26
SDCBP2-201ENST00000339987 AKAP13Q12802 2813 aa16.65■□□□□ 0.26
SDCBP2-201ENST00000339987 PRAMEF2O60811 474 aa16.64■□□□□ 0.25
SDCBP2-201ENST00000339987 PPIBP23284 216 aaKnown RBP16.64■□□□□ 0.25
SDCBP2-201ENST00000339987 SSTR4P31391 388 aa16.64■□□□□ 0.25
SDCBP2-201ENST00000339987 SLC37A1P57057 533 aa16.64■□□□□ 0.25
SDCBP2-201ENST00000339987 DUSP8Q13202 625 aa16.64■□□□□ 0.25
SDCBP2-201ENST00000339987 EXOSC7Q15024 291 aaKnown RBP16.64■□□□□ 0.25
SDCBP2-201ENST00000339987 SAXO2Q658L1 398 aa16.64■□□□□ 0.25
SDCBP2-201ENST00000339987 PLAG1Q6DJT9 500 aa16.64■□□□□ 0.25
SDCBP2-201ENST00000339987 ZNF615Q8N8J6 731 aa16.64■□□□□ 0.25
SDCBP2-201ENST00000339987 NUP43Q8NFH3 380 aa16.64■□□□□ 0.25
SDCBP2-201ENST00000339987 THAP4Q8WY91 577 aa16.64■□□□□ 0.25
SDCBP2-201ENST00000339987 VMP1Q96GC9 406 aa16.64■□□□□ 0.25
SDCBP2-201ENST00000339987 MAGED4Q96JG8 741 aa16.64■□□□□ 0.25
SDCBP2-201ENST00000339987 ANKRD27Q96NW4 1050 aa16.64■□□□□ 0.25
SDCBP2-201ENST00000339987 MS4A4EQ96PG1 132 aa16.64■□□□□ 0.25
SDCBP2-201ENST00000339987 NUDT9Q9BW91 350 aa16.64■□□□□ 0.25
SDCBP2-201ENST00000339987 OR10A5Q9H207 317 aa16.64■□□□□ 0.25
SDCBP2-201ENST00000339987 IL1RL2Q9HB29 575 aa16.64■□□□□ 0.25
SDCBP2-201ENST00000339987 PCSK5Q92824 1860 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 OR6C76A6NM76 312 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 HNRNPCL1O60812 293 aaKnown RBP16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 ATP5HO75947 161 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 KRT75O95678 551 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 KRT16P08779 473 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 CHI3L1P36222 383 aaPredicted RBP16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 MAGEA8P43361 318 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 ATP1A4Q13733 1029 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 RUNDC3AQ59EK9 446 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 C8orf82Q6P1X6 216 aaPredicted RBP16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 UNQ6494/PRO21346Q6UXR6 183 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 RNF111Q6ZNA4 994 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 SPACA3Q8IXA5 215 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 APCDD1LQ8NCL9 501 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 SIMC1Q8NDZ2 872 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 OR52R1Q8NGF1 315 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 OR5AK3PQ8NH89 298 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 M1APQ8TC57 530 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 NCLNQ969V3 563 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 GIMAP5Q96F15 307 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 HOPXQ9BPY8 73 aaPredicted RBP16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 CPPED1Q9BRF8 314 aaPredicted RBP16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 GPATCH1Q9BRR8 931 aaKnown RBP16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 ANKRA2Q9H9E1 313 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 TPT1P8Q9HAU6 139 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 GPATCH2Q9NW75 528 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 NDE1Q9NXR1 346 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 PRODH2Q9UF12 536 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 BCAP29Q9UHQ4 241 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 CFL2Q9Y281 166 aa16.63■□□□□ 0.25
SDCBP2-201ENST00000339987 C15orf38-AP3S2A0A0A6YYH1 394 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 CDC14CA4D256 554 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 B2RBV5 119 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 CLIC1O00299 241 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 RRP8O43159 456 aaKnown RBP16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 UNC5CO95185 931 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 ICAM2P13598 275 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 EMDP50402 254 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 VAC14Q08AM6 782 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 TP53BP2Q13625 1128 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 ZCCHC12Q6PEW1 402 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 C6orf120Q7Z4R8 191 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 ARPINQ7Z6K5 226 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 CLEC4FQ8N1N0 589 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 ZNF321PQ8N8H1 164 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 OR8K3Q8NH51 312 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 HOXB13Q92826 284 aaPredicted RBP16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 RAD21L1Q9H4I0 556 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 ZNF160Q9HCG1 818 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 MMP25Q9NPA2 562 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 HEMK1Q9Y5R4 338 aaPredicted RBP16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 NCOR2Q9Y618 2525 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 C1QTNF9BB2RNN3 333 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 NKX2-8O15522 239 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 EFSO43281 561 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 C1QTNF9P0C862 333 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 PRIM2P49643 509 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 CLCN2P51788 898 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 PRKAG1P54619 331 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 AP2B1P63010 937 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 TXNL4AP83876 142 aaKnown RBP16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 MXRA7P84157 204 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 CDC20Q12834 499 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 CAPRIN1Q14444 709 aaKnown RBP16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 BTBD16Q32M84 506 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 NANOGP8Q6NSW7 305 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 MFSD12Q6NUT3 480 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 CCDC121Q6ZUS5 278 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 GPR155Q7Z3F1 870 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 SZRD1Q7Z422 152 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 RBM15BQ8NDT2 890 aaKnown RBP16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 OR8J3Q8NGG0 315 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 C16orf52Q8NHV5 167 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 FBXO27Q8NI29 283 aa16.62■□□□□ 0.25
SDCBP2-201ENST00000339987 MIPOL1Q8TD10 442 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms