RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 ANGPTL4Q9BY76 406 aa17.81■□□□□ 0.44
ITGA4-202ENST00000339307 NXF5Q9H1B4 397 aaKnown RBP17.81■□□□□ 0.44
ITGA4-202ENST00000339307 NMRK1Q9NWW6 199 aa17.81■□□□□ 0.44
ITGA4-202ENST00000339307 PSME2Q9UL46 239 aa17.81■□□□□ 0.44
ITGA4-202ENST00000339307 A0A1B0GTL3 188 aa17.8■□□□□ 0.44
ITGA4-202ENST00000339307 AHRRA9YTQ3 701 aa17.8■□□□□ 0.44
ITGA4-202ENST00000339307 DVL2O14641 736 aa17.8■□□□□ 0.44
ITGA4-202ENST00000339307 CSNK2A2P19784 350 aaPredicted RBP17.8■□□□□ 0.44
ITGA4-202ENST00000339307 GPX3P22352 226 aa17.8■□□□□ 0.44
ITGA4-202ENST00000339307 CNTFP26441 200 aa17.8■□□□□ 0.44
ITGA4-202ENST00000339307 ABCD3P28288 659 aa17.8■□□□□ 0.44
ITGA4-202ENST00000339307 MAGEA12P43365 314 aa17.8■□□□□ 0.44
ITGA4-202ENST00000339307 KIR2DL3P43628 341 aa17.8■□□□□ 0.44
ITGA4-202ENST00000339307 ART1P52961 327 aa17.8■□□□□ 0.44
ITGA4-202ENST00000339307 FAM219BQ5XKK7 198 aa17.8■□□□□ 0.44
ITGA4-202ENST00000339307 SLC48A1Q6P1K1 146 aa17.8■□□□□ 0.44
ITGA4-202ENST00000339307 LETMD1Q6P1Q0 360 aa17.8■□□□□ 0.44
ITGA4-202ENST00000339307 TNIP2Q8NFZ5 429 aa17.8■□□□□ 0.44
ITGA4-202ENST00000339307 TRPC4APQ8TEL6 797 aa17.8■□□□□ 0.44
ITGA4-202ENST00000339307 DCAKDQ8WVC6 231 aa17.8■□□□□ 0.44
ITGA4-202ENST00000339307 ISL2Q96A47 359 aa17.8■□□□□ 0.44
ITGA4-202ENST00000339307 FAIM2Q9BWQ8 316 aa17.8■□□□□ 0.44
ITGA4-202ENST00000339307 DNAJB12Q9NXW2 375 aaKnown RBP17.8■□□□□ 0.44
ITGA4-202ENST00000339307 CFL2Q9Y281 166 aa17.8■□□□□ 0.44
ITGA4-202ENST00000339307 DTX4Q9Y2E6 619 aa17.8■□□□□ 0.44
ITGA4-202ENST00000339307 L3MBTL1Q9Y468 752 aa17.8■□□□□ 0.44
ITGA4-202ENST00000339307 PCDHGB3Q9Y5G1 929 aa17.8■□□□□ 0.44
ITGA4-202ENST00000339307 ZNF780BQ9Y6R6 833 aa17.8■□□□□ 0.44
ITGA4-202ENST00000339307 A0A087WUV0 522 aaPredicted RBP17.79■□□□□ 0.44
ITGA4-202ENST00000339307 C2orf72A6NCS6 295 aa17.79■□□□□ 0.44
ITGA4-202ENST00000339307 A8MT66 165 aa17.79■□□□□ 0.44
ITGA4-202ENST00000339307 OR4F21O95013 312 aa17.79■□□□□ 0.44
ITGA4-202ENST00000339307 IL2RAP01589 272 aa17.79■□□□□ 0.44
ITGA4-202ENST00000339307 RPS17P08708 135 aaKnown RBP17.79■□□□□ 0.44
ITGA4-202ENST00000339307 TAC1P20366 129 aa17.79■□□□□ 0.44
ITGA4-202ENST00000339307 CDK9P50750 372 aaKnown RBP17.79■□□□□ 0.44
ITGA4-202ENST00000339307 CRYZQ08257 329 aaKnown RBP17.79■□□□□ 0.44
ITGA4-202ENST00000339307 GGTA1PQ4G0N0 100 aa17.79■□□□□ 0.44
ITGA4-202ENST00000339307 ACSF3Q4G176 576 aaPredicted RBP17.79■□□□□ 0.44
ITGA4-202ENST00000339307 EIPR1Q53HC9 387 aa17.79■□□□□ 0.44
ITGA4-202ENST00000339307 WIPI1Q5MNZ9 446 aaPredicted RBP17.79■□□□□ 0.44
ITGA4-202ENST00000339307 LGSNQ5TDP6 509 aa17.79■□□□□ 0.44
ITGA4-202ENST00000339307 ANGPTL8Q6UXH0 198 aa17.79■□□□□ 0.44
ITGA4-202ENST00000339307 SEM1Q6ZVN7 128 aa17.79■□□□□ 0.44
ITGA4-202ENST00000339307 PM20D2Q8IYS1 436 aa17.79■□□□□ 0.44
ITGA4-202ENST00000339307 C1orf52Q8N6N3 182 aaKnown RBP17.79■□□□□ 0.44
ITGA4-202ENST00000339307 NOA1Q8NC60 698 aaKnown RBP17.79■□□□□ 0.44
ITGA4-202ENST00000339307 OR1J4Q8NGS1 313 aa17.79■□□□□ 0.44
ITGA4-202ENST00000339307 ZNF483Q8TF39 744 aaPredicted RBP17.79■□□□□ 0.44
ITGA4-202ENST00000339307 TRIB1Q96RU8 372 aa17.79■□□□□ 0.44
ITGA4-202ENST00000339307 SECISBP2Q96T21 854 aaKnown RBP17.79■□□□□ 0.44
ITGA4-202ENST00000339307 POLDIP3Q9BY77 421 aaKnown RBP17.79■□□□□ 0.44
ITGA4-202ENST00000339307 FUT8Q9BYC5 575 aa17.79■□□□□ 0.44
ITGA4-202ENST00000339307 EHD3Q9NZN3 535 aa17.79■□□□□ 0.44
ITGA4-202ENST00000339307 KLRF1Q9NZS2 232 aa17.79■□□□□ 0.44
ITGA4-202ENST00000339307 C15orf41Q9Y2V0 281 aa17.79■□□□□ 0.44
ITGA4-202ENST00000339307 F8P00451 2351 aa17.79■□□□□ 0.44
ITGA4-202ENST00000339307 FREM3P0C091 2139 aa17.78■□□□□ 0.44
ITGA4-202ENST00000339307 ANKRD17O75179 2603 aaKnown RBP17.78■□□□□ 0.44
ITGA4-202ENST00000339307 EXOC1LA0A1B0GW35 172 aa17.78■□□□□ 0.44
ITGA4-202ENST00000339307 KDM4EB2RXH2 506 aaPredicted RBP17.78■□□□□ 0.44
ITGA4-202ENST00000339307 SUPT7LO94864 414 aa17.78■□□□□ 0.44
ITGA4-202ENST00000339307 EPPINO95925 133 aa17.78■□□□□ 0.44
ITGA4-202ENST00000339307 ABCB1P08183 1280 aaPredicted RBP17.78■□□□□ 0.44
ITGA4-202ENST00000339307 RIPPLY3P57055 190 aa17.78■□□□□ 0.44
ITGA4-202ENST00000339307 PLCXD2Q0VAA5 305 aa17.78■□□□□ 0.44
ITGA4-202ENST00000339307 GALNT1Q10472 559 aaPredicted RBP17.78■□□□□ 0.44
ITGA4-202ENST00000339307 SF3B4Q15427 424 aaKnown RBP eCLIP17.78■□□□□ 0.44
ITGA4-202ENST00000339307 TESK1Q15569 626 aa17.78■□□□□ 0.44
ITGA4-202ENST00000339307 PRICKLE4Q2TBC4 344 aa17.78■□□□□ 0.44
ITGA4-202ENST00000339307 DESI1Q6ICB0 168 aa17.78■□□□□ 0.44
ITGA4-202ENST00000339307 CDYL2Q8N8U2 506 aa17.78■□□□□ 0.44
ITGA4-202ENST00000339307 TM4SF18Q96CE8 201 aa17.78■□□□□ 0.44
ITGA4-202ENST00000339307 OMA1Q96E52 524 aa17.78■□□□□ 0.44
ITGA4-202ENST00000339307 ITPAQ9BY32 194 aa17.78■□□□□ 0.44
ITGA4-202ENST00000339307 BRF2Q9HAW0 419 aa17.78■□□□□ 0.44
ITGA4-202ENST00000339307 ZNF180Q9UJW8 692 aa17.78■□□□□ 0.44
ITGA4-202ENST00000339307 CES1P1Q9UKY3 287 aa17.78■□□□□ 0.44
ITGA4-202ENST00000339307 PPM1BO75688 479 aa17.77■□□□□ 0.44
ITGA4-202ENST00000339307 HPNP05981 417 aa17.77■□□□□ 0.44
ITGA4-202ENST00000339307 SNRPAP09012 282 aaKnown RBP17.77■□□□□ 0.44
ITGA4-202ENST00000339307 S1PR1P21453 382 aa17.77■□□□□ 0.44
ITGA4-202ENST00000339307 GCKP35557 465 aa17.77■□□□□ 0.44
ITGA4-202ENST00000339307 CLCQ05315 142 aa17.77■□□□□ 0.44
ITGA4-202ENST00000339307 LTB4RQ15722 352 aa17.77■□□□□ 0.44
ITGA4-202ENST00000339307 TCHHL1Q5QJ38 904 aaPredicted RBP17.77■□□□□ 0.44
ITGA4-202ENST00000339307 SPNS3Q6ZMD2 512 aa17.77■□□□□ 0.44
ITGA4-202ENST00000339307 YRDCQ86U90 279 aaKnown RBP17.77■□□□□ 0.44
ITGA4-202ENST00000339307 LACC1Q8IV20 430 aa17.77■□□□□ 0.44
ITGA4-202ENST00000339307 NAXEQ8NCW5 288 aa17.77■□□□□ 0.44
ITGA4-202ENST00000339307 SIMC1Q8NDZ2 872 aa17.77■□□□□ 0.44
ITGA4-202ENST00000339307 C17orf47Q8NEP4 570 aa17.77■□□□□ 0.44
ITGA4-202ENST00000339307 OR52R1Q8NGF1 315 aa17.77■□□□□ 0.44
ITGA4-202ENST00000339307 ABTB1Q969K4 478 aaPredicted RBP17.77■□□□□ 0.44
ITGA4-202ENST00000339307 HSPBAP1Q96EW2 488 aa17.77■□□□□ 0.44
ITGA4-202ENST00000339307 LCORQ96JN0 433 aaPredicted RBP17.77■□□□□ 0.44
ITGA4-202ENST00000339307 EPB41L4BQ9H329 900 aa17.77■□□□□ 0.44
ITGA4-202ENST00000339307 MAT2BQ9NZL9 334 aa17.77■□□□□ 0.44
ITGA4-202ENST00000339307 VPS29Q9UBQ0 182 aa17.77■□□□□ 0.44
ITGA4-202ENST00000339307 TRPS1Q9UHF7 1281 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms