RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 SLC29A4Q7RTT9 530 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 LDLRAD3Q86YD5 345 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 ADGRG2Q8IZP9 1017 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 OR56B1Q8NGI3 324 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 CNOT9Q92600 299 aaKnown RBP3.96□□□□□ -1.78
NEDD4-201ENST00000338963 GGHQ92820 318 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 LRRN3Q9H3W5 708 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 ACSS1Q9NUB1 689 aaPredicted RBP3.96□□□□□ -1.78
NEDD4-201ENST00000338963 DDIT4Q9NX09 232 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 FZD10Q9ULW2 581 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 ADAM18Q9Y3Q7 739 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 ELOVL7A1L3X0 281 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 SPDYE2BA6NHP3 402 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 H0YIN7 160 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 EFSO43281 561 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 SH3BGRLO75368 114 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 MOCS2O96007 188 aaPredicted RBP3.95□□□□□ -1.78
NEDD4-201ENST00000338963 IL5P05113 134 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 SPDYE6P0CI01 402 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 HOXD8P13378 290 aaPredicted RBP3.95□□□□□ -1.78
NEDD4-201ENST00000338963 ICAM3P32942 547 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 GDF10P55107 478 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 LSM11P83369 360 aaKnown RBP eCLIP3.95□□□□□ -1.78
NEDD4-201ENST00000338963 MED22Q15528 200 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 ZNF79Q15937 498 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 SPDYE2Q495Y8 402 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 C14orf28Q4W4Y0 310 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 ASPRV1Q53RT3 343 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 BCL2L15Q5TBC7 163 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 C9orf131Q5VYM1 1079 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 FBXO42Q6P3S6 717 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 FIGNL1Q6PIW4 674 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 TMCO2Q7Z6W1 182 aaPredicted RBP3.95□□□□□ -1.78
NEDD4-201ENST00000338963 SLC7A13Q8TCU3 470 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 OR8D1Q8WZ84 308 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 ULK4Q96C45 1275 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 FAM120BQ96EK7 910 aaKnown RBP3.95□□□□□ -1.78
NEDD4-201ENST00000338963 MAP3K3Q99759 626 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 PBDC1Q9BVG4 233 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 AP5M1Q9H0R1 490 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 RHOJQ9H4E5 214 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 CHST11Q9NPF2 352 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 SDR39U1Q9NRG7 319 aaPredicted RBP3.95□□□□□ -1.78
NEDD4-201ENST00000338963 PNO1Q9NRX1 252 aaKnown RBP3.95□□□□□ -1.78
NEDD4-201ENST00000338963 EGFL7Q9UHF1 273 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 EIF2B4Q9UI10 523 aaKnown RBP3.95□□□□□ -1.78
NEDD4-201ENST00000338963 A0A1W2PQL4 384 aaPredicted RBP3.95□□□□□ -1.78
NEDD4-201ENST00000338963 TCRBV5S4A2TA0A5A2 114 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 PRAMEF22A3QJZ6 481 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 CDRT1O95170 752 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 HOXB5P09067 269 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 NR2F1P10589 423 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 RPA2P15927 270 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 MUC1P15941 1255 aaPredicted RBP3.95□□□□□ -1.78
NEDD4-201ENST00000338963 HOXA5P20719 270 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 MSR1P21757 451 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 PTPN3P26045 913 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 PRPS1P60891 318 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 KIAA0141Q14154 515 aaPredicted RBP3.95□□□□□ -1.78
NEDD4-201ENST00000338963 GPR176Q14439 515 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 ZSWIM7Q19AV6 140 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 ELFN2Q5R3F8 820 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 ATG9BQ674R7 924 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 LEMD1Q68G75 181 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 SLC16A14Q7RTX9 510 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 NRROSQ86YC3 692 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 MAML2Q8IZL2 1156 aaPredicted RBP3.95□□□□□ -1.78
NEDD4-201ENST00000338963 PUSL1Q8N0Z8 303 aaKnown RBP3.95□□□□□ -1.78
NEDD4-201ENST00000338963 PQLC3Q8N755 202 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 C16orf78Q8WTQ4 265 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 CA5BP1Q8WTZ4 195 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 MENTQ9BUN1 341 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 ASB8Q9H765 288 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 NMNAT1Q9HAN9 279 aaPredicted RBP3.95□□□□□ -1.78
NEDD4-201ENST00000338963 SEPSECSQ9HD40 501 aaKnown RBP3.95□□□□□ -1.78
NEDD4-201ENST00000338963 NDUFB11Q9NX14 153 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 SIX4Q9UIU6 781 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 CDV3Q9UKY7 258 aaKnown RBP3.95□□□□□ -1.78
NEDD4-201ENST00000338963 ST3GAL5Q9UNP4 418 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 HMX2A2RU54 273 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 MCRIP1C9JLW8 97 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 MBTPS2O43462 519 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 TSPAN6O43657 245 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 ENTPD6O75354 484 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 MPC2O95563 127 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 C1QAP02745 245 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 OR5AC1P0C628 307 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 ENGP17813 658 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 GPX3P22352 226 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 NDUFS1P28331 727 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 NKX6-1P78426 367 aaPredicted RBP3.95□□□□□ -1.78
NEDD4-201ENST00000338963 BOP1Q14137 746 aaKnown RBP3.95□□□□□ -1.78
NEDD4-201ENST00000338963 TAZQ16635 292 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 PLA1AQ53H76 456 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 SOWAHCQ53LP3 525 aaPredicted RBP3.95□□□□□ -1.78
NEDD4-201ENST00000338963 TMEM198Q66K66 360 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 PXKQ7Z7A4 578 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 TRAPPC5Q8IUR0 188 aa3.95□□□□□ -1.78
NEDD4-201ENST00000338963 NKAPQ8N5F7 415 aaKnown RBP3.95□□□□□ -1.78
NEDD4-201ENST00000338963 GLIS1Q8NBF1 620 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms