RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 C1QTNF9P0C862 333 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 TRAPPC2P0DI81 140 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 TRAPPC2BP0DI82 140 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 ACADMP11310 421 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 GNSP15586 552 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 CSTF2P33240 577 aaKnown RBP eCLIP10.19□□□□□ -0.78
RTN3-201ENST00000338850 KCNJ5P48544 419 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 PCBP4P57723 403 aaKnown RBP10.19□□□□□ -0.78
RTN3-201ENST00000338850 TAS2R50P59544 299 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 ST8SIA6P61647 398 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 SIM1P81133 766 aaPredicted RBP10.19□□□□□ -0.78
RTN3-201ENST00000338850 CNTN1Q12860 1018 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 MLLT11Q13015 90 aaPredicted RBP10.19□□□□□ -0.78
RTN3-201ENST00000338850 AGERQ15109 404 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 FNDC3BQ53EP0 1204 aaKnown RBP10.19□□□□□ -0.78
RTN3-201ENST00000338850 PERM1Q5SV97 790 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 DEPDC1Q5TB30 811 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 KHDRBS2Q5VWX1 349 aaKnown RBP10.19□□□□□ -0.78
RTN3-201ENST00000338850 KLHL17Q6TDP4 642 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 UNQ6494/PRO21346Q6UXR6 183 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 VN1R5Q7Z5H4 357 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 SLC22A16Q86VW1 577 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 ZNF366Q8N895 744 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 FAM181AQ8N9Y4 354 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 AQP11Q8NBQ7 271 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 PROKR2Q8NFJ6 384 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 B3GNT7Q8NFL0 401 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 GPR156Q8NFN8 814 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 TTLQ8NG68 377 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 OR4K1Q8NGD4 311 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 OR8J1Q8NGP2 316 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 MOAP1Q96BY2 351 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 TMCO6Q96DC7 493 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 ZBED6CLQ96FA7 236 aaPredicted RBP10.19□□□□□ -0.78
RTN3-201ENST00000338850 COX14Q96I36 57 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 MGLLQ99685 303 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 AIF1LQ9BQI0 150 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 SCNM1Q9BWG6 230 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 ZDHHC5Q9C0B5 715 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 SLC6A16Q9GZN6 736 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 NMNAT1Q9HAN9 279 aaPredicted RBP10.19□□□□□ -0.78
RTN3-201ENST00000338850 ZBTB20Q9HC78 741 aaPredicted RBP10.19□□□□□ -0.78
RTN3-201ENST00000338850 INIPQ9NRY2 104 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 RLIMQ9NVW2 624 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 REV1Q9UBZ9 1251 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 TMCC3Q9ULS5 477 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 STUB1Q9UNE7 303 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 RPL36Q9Y3U8 105 aaKnown RBP10.19□□□□□ -0.78
RTN3-201ENST00000338850 GPC6Q9Y625 555 aaPredicted RBP10.19□□□□□ -0.78
RTN3-201ENST00000338850 PCNX2A6NKB5 2137 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 CEP192Q8TEP8 1941 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 AKAP13Q12802 2813 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 ADAMTS9Q9P2N4 1935 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 A0A1W2PRQ8 180 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 CASC3O15234 703 aaKnown RBP10.18□□□□□ -0.78
RTN3-201ENST00000338850 ZW10O43264 779 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 HYAL3O43820 417 aaPredicted RBP10.18□□□□□ -0.78
RTN3-201ENST00000338850 MAN1A2O60476 641 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 IL3P08700 152 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 DRD2P14416 443 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 ELAVL4P26378 380 aaKnown RBP10.18□□□□□ -0.78
RTN3-201ENST00000338850 PDHA2P29803 388 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 ALDH4A1P30038 563 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 BSGP35613 385 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 IDH2P48735 452 aaKnown RBP10.18□□□□□ -0.78
RTN3-201ENST00000338850 TMED10P49755 219 aaKnown RBP10.18□□□□□ -0.78
RTN3-201ENST00000338850 EIF2B2P49770 351 aaKnown RBP10.18□□□□□ -0.78
RTN3-201ENST00000338850 LSM3P62310 102 aaKnown RBP10.18□□□□□ -0.78
RTN3-201ENST00000338850 DMPKQ09013 629 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 GNA13Q14344 377 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 ELAVL3Q14576 367 aaKnown RBP10.18□□□□□ -0.78
RTN3-201ENST00000338850 SYT16Q17RD7 645 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 TMEM44Q2T9K0 475 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 HNRNPA1L2Q32P51 320 aaKnown RBP10.18□□□□□ -0.78
RTN3-201ENST00000338850 SPANXN2Q5MJ10 180 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 MFSD4BQ5TF39 518 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 ADNP2Q6IQ32 1131 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 C11orf96Q7Z7L8 435 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 MRGPREQ86SM8 312 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 NUDT13Q86X67 352 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 TAGAPQ8N103 731 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 FAM26EQ8N5C1 309 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 C1orf216Q8TAB5 229 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 WDR48Q8TAF3 677 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 BBS10Q8TAM1 723 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 KLHL6Q8WZ60 621 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 OR8D1Q8WZ84 308 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 UBE2FQ969M7 185 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 KIAA1143Q96AT1 154 aaPredicted RBP10.18□□□□□ -0.78
RTN3-201ENST00000338850 ZNF354BQ96LW1 612 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 ZNF607Q96SK3 696 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 MYOCQ99972 504 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 SPATA5L1Q9BVQ7 753 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 MND1Q9BWT6 205 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 POLDIP3Q9BY77 421 aaKnown RBP10.18□□□□□ -0.78
RTN3-201ENST00000338850 UCK2Q9BZX2 261 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 MIR1-1HGQ9H1L0 117 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 PCED1AQ9H1Q7 454 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 ANKRD19PQ9H560 264 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 ARMC7Q9H6L4 198 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms