RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 INO80CQ6PI98 192 aaPredicted RBP16.27■□□□□ 0.19
CHGA-202ENST00000334654 C6orf89Q6UWU4 347 aa16.27■□□□□ 0.19
CHGA-202ENST00000334654 TMEM64Q6YI46 380 aa16.27■□□□□ 0.19
CHGA-202ENST00000334654 LRRC69Q6ZNQ3 347 aa16.27■□□□□ 0.19
CHGA-202ENST00000334654 TRPM8Q7Z2W7 1104 aa16.27■□□□□ 0.19
CHGA-202ENST00000334654 KIF2BQ8N4N8 673 aa16.27■□□□□ 0.19
CHGA-202ENST00000334654 OR7G1Q8NGA0 311 aa16.27■□□□□ 0.19
CHGA-202ENST00000334654 OR52R1Q8NGF1 315 aa16.27■□□□□ 0.19
CHGA-202ENST00000334654 GIMAP5Q96F15 307 aa16.27■□□□□ 0.19
CHGA-202ENST00000334654 NPAS2Q99743 824 aa16.27■□□□□ 0.19
CHGA-202ENST00000334654 OR10A5Q9H207 317 aa16.27■□□□□ 0.19
CHGA-202ENST00000334654 MMP25Q9NPA2 562 aa16.27■□□□□ 0.19
CHGA-202ENST00000334654 SLC25A37Q9NYZ2 338 aa16.27■□□□□ 0.19
CHGA-202ENST00000334654 PCDHGB4Q9UN71 923 aa16.27■□□□□ 0.19
CHGA-202ENST00000334654 DTX4Q9Y2E6 619 aa16.27■□□□□ 0.19
CHGA-202ENST00000334654 PCDHB14Q9Y5E9 798 aa16.27■□□□□ 0.19
CHGA-202ENST00000334654 MAP1BP46821 2468 aaKnown RBP16.27■□□□□ 0.19
CHGA-202ENST00000334654 DSPP15924 2871 aaKnown RBP16.26■□□□□ 0.19
CHGA-202ENST00000334654 A0A096LPI6 279 aa16.26■□□□□ 0.19
CHGA-202ENST00000334654 BBIP1A8MTZ0 92 aa16.26■□□□□ 0.19
CHGA-202ENST00000334654 ANGPT2O15123 496 aa16.26■□□□□ 0.19
CHGA-202ENST00000334654 EMC8O43402 210 aa16.26■□□□□ 0.19
CHGA-202ENST00000334654 T-ENOLP0DO92 83 aa16.26■□□□□ 0.19
CHGA-202ENST00000334654 CCT3P49368 545 aaKnown RBP16.26■□□□□ 0.19
CHGA-202ENST00000334654 STX5Q13190 355 aa16.26■□□□□ 0.19
CHGA-202ENST00000334654 REP15Q6BDI9 236 aa16.26■□□□□ 0.19
CHGA-202ENST00000334654 C9orf40Q8IXQ3 194 aa16.26■□□□□ 0.19
CHGA-202ENST00000334654 ZSCAN1Q8NBB4 408 aa16.26■□□□□ 0.19
CHGA-202ENST00000334654 OR5AK3PQ8NH89 298 aa16.26■□□□□ 0.19
CHGA-202ENST00000334654 C16orf52Q8NHV5 167 aa16.26■□□□□ 0.19
CHGA-202ENST00000334654 RCN3Q96D15 328 aa16.26■□□□□ 0.19
CHGA-202ENST00000334654 VMP1Q96GC9 406 aa16.26■□□□□ 0.19
CHGA-202ENST00000334654 VPS50Q96JG6 964 aa16.26■□□□□ 0.19
CHGA-202ENST00000334654 MAGED4Q96JG8 741 aa16.26■□□□□ 0.19
CHGA-202ENST00000334654 ART5Q96L15 291 aa16.26■□□□□ 0.19
CHGA-202ENST00000334654 POLHQ9Y253 713 aa16.26■□□□□ 0.19
CHGA-202ENST00000334654 SNX8Q9Y5X2 465 aa16.26■□□□□ 0.19
CHGA-202ENST00000334654 CACNA1GO43497 2377 aa16.25■□□□□ 0.19
CHGA-202ENST00000334654 TMEM200CA6NKL6 621 aa16.25■□□□□ 0.19
CHGA-202ENST00000334654 FXYD1O00168 92 aa16.25■□□□□ 0.19
CHGA-202ENST00000334654 DYRK3O43781 588 aa16.25■□□□□ 0.19
CHGA-202ENST00000334654 ERN1O75460 977 aaKnown RBP16.25■□□□□ 0.19
CHGA-202ENST00000334654 ITGAMP11215 1152 aa16.25■□□□□ 0.19
CHGA-202ENST00000334654 UQCRC2P22695 453 aa16.25■□□□□ 0.19
CHGA-202ENST00000334654 FOXK2Q01167 660 aa16.25■□□□□ 0.19
CHGA-202ENST00000334654 ZSCAN26Q16670 478 aa16.25■□□□□ 0.19
CHGA-202ENST00000334654 EXOSC6Q5RKV6 272 aaKnown RBP16.25■□□□□ 0.19
CHGA-202ENST00000334654 C6orf10Q5SRN2 563 aa16.25■□□□□ 0.19
CHGA-202ENST00000334654 BROXQ5VW32 411 aa16.25■□□□□ 0.19
CHGA-202ENST00000334654 DNAJC14Q6Y2X3 702 aaPredicted RBP16.25■□□□□ 0.19
CHGA-202ENST00000334654 ZNF621Q6ZSS3 439 aa16.25■□□□□ 0.19
CHGA-202ENST00000334654 TMEM102Q8N9M5 508 aaPredicted RBP16.25■□□□□ 0.19
CHGA-202ENST00000334654 NUP43Q8NFH3 380 aa16.25■□□□□ 0.19
CHGA-202ENST00000334654 SFXN5Q8TD22 340 aa16.25■□□□□ 0.19
CHGA-202ENST00000334654 ZFP90Q8TF47 636 aa16.25■□□□□ 0.19
CHGA-202ENST00000334654 SNRNP27Q8WVK2 155 aaKnown RBP16.25■□□□□ 0.19
CHGA-202ENST00000334654 PSMF1Q92530 271 aa16.25■□□□□ 0.19
CHGA-202ENST00000334654 HOXB13Q92826 284 aaPredicted RBP16.25■□□□□ 0.19
CHGA-202ENST00000334654 CMTM5Q96DZ9 223 aa16.25■□□□□ 0.19
CHGA-202ENST00000334654 FER1L6-AS2Q96M78 137 aa16.25■□□□□ 0.19
CHGA-202ENST00000334654 C3orf14Q9HBI5 128 aa16.25■□□□□ 0.19
CHGA-202ENST00000334654 DDX18Q9NVP1 670 aaKnown RBP16.25■□□□□ 0.19
CHGA-202ENST00000334654 GPATCH2Q9NW75 528 aa16.25■□□□□ 0.19
CHGA-202ENST00000334654 VAPAQ9P0L0 249 aa16.25■□□□□ 0.19
CHGA-202ENST00000334654 ARGFXA6NJG6 315 aa16.24■□□□□ 0.19
CHGA-202ENST00000334654 CCT8L1PA6NM43 557 aa16.24■□□□□ 0.19
CHGA-202ENST00000334654 MRASO14807 208 aa16.24■□□□□ 0.19
CHGA-202ENST00000334654 BCAS2O75934 225 aaPredicted RBP16.24■□□□□ 0.19
CHGA-202ENST00000334654 CBX6O95503 412 aa16.24■□□□□ 0.19
CHGA-202ENST00000334654 SERPINA7P05543 415 aa16.24■□□□□ 0.19
CHGA-202ENST00000334654 ICAM2P13598 275 aa16.24■□□□□ 0.19
CHGA-202ENST00000334654 MAP3K8P41279 467 aa16.24■□□□□ 0.19
CHGA-202ENST00000334654 CLCN2P51788 898 aa16.24■□□□□ 0.19
CHGA-202ENST00000334654 SOX8P57073 446 aa16.24■□□□□ 0.19
CHGA-202ENST00000334654 RNF4P78317 190 aa16.24■□□□□ 0.19
CHGA-202ENST00000334654 CHAF1BQ13112 559 aa16.24■□□□□ 0.19
CHGA-202ENST00000334654 DEFB109BQ30KR1 87 aa16.24■□□□□ 0.19
CHGA-202ENST00000334654 C6orf163Q5TEZ5 329 aa16.24■□□□□ 0.19
CHGA-202ENST00000334654 SAXO2Q658L1 398 aa16.24■□□□□ 0.19
CHGA-202ENST00000334654 H3F3CQ6NXT2 135 aa16.24■□□□□ 0.19
CHGA-202ENST00000334654 RNF111Q6ZNA4 994 aa16.24■□□□□ 0.19
CHGA-202ENST00000334654 AURKBQ96GD4 344 aaPredicted RBP16.24■□□□□ 0.19
CHGA-202ENST00000334654 VSTM2LQ96N03 204 aa16.24■□□□□ 0.19
CHGA-202ENST00000334654 ATP13A2Q9NQ11 1180 aa16.24■□□□□ 0.19
CHGA-202ENST00000334654 ZCCHC3Q9NUD5 404 aaKnown RBP16.24■□□□□ 0.19
CHGA-202ENST00000334654 BCAP29Q9UHQ4 241 aa16.24■□□□□ 0.19
CHGA-202ENST00000334654 TAGLN3Q9UI15 199 aa16.24■□□□□ 0.19
CHGA-202ENST00000334654 VPS4AQ9UN37 437 aa16.24■□□□□ 0.19
CHGA-202ENST00000334654 HEMK1Q9Y5R4 338 aaPredicted RBP16.24■□□□□ 0.19
CHGA-202ENST00000334654 KCNMB2Q9Y691 235 aa16.24■□□□□ 0.19
CHGA-202ENST00000334654 GMEB1Q9Y692 573 aa16.24■□□□□ 0.19
CHGA-202ENST00000334654 TRBV11-1A0A0K0K1C0 115 aa16.23■□□□□ 0.19
CHGA-202ENST00000334654 PRAMEF2O60811 474 aa16.23■□□□□ 0.19
CHGA-202ENST00000334654 KCNH1O95259 989 aa16.23■□□□□ 0.19
CHGA-202ENST00000334654 HMGN2P05204 90 aaKnown RBP16.23■□□□□ 0.19
CHGA-202ENST00000334654 SOAT1P35610 550 aa16.23■□□□□ 0.19
CHGA-202ENST00000334654 MVDP53602 400 aa16.23■□□□□ 0.19
CHGA-202ENST00000334654 PRKAG1P54619 331 aa16.23■□□□□ 0.19
CHGA-202ENST00000334654 UCNP55089 124 aa16.23■□□□□ 0.19
CHGA-202ENST00000334654 VAC14Q08AM6 782 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms