RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ZNF382Q96SR6 550 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 NIFKQ9BYG3 293 aaKnown RBP9.38□□□□□ -0.91
COL4A6-201ENST00000334504 PIGVQ9NUD9 493 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 AIG1Q9NVV5 245 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 DUS2Q9NX74 493 aaKnown RBP9.38□□□□□ -0.91
COL4A6-201ENST00000334504 ABI3Q9P2A4 366 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 IL36AQ9UHA7 158 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 B3GNT3Q9Y2A9 372 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 ADAP00813 363 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 PRKCAP17252 672 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 MLLT3P42568 568 aaPredicted RBP9.37□□□□□ -0.91
COL4A6-201ENST00000334504 STC1P52823 247 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 MGAT3Q09327 533 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 RPL13AP3Q6NVV1 102 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 AGTRAPQ6RW13 159 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 PARP16Q8N5Y8 322 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 CAMKVQ8NCB2 501 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 BBS1Q8NFJ9 593 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 OR4K17Q8NGC6 315 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 FCRL3Q96P31 734 aaPredicted RBP9.37□□□□□ -0.91
COL4A6-201ENST00000334504 FEVQ99581 238 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 SUV39H2Q9H5I1 410 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 A0A1W2PQ45 241 aaPredicted RBP9.37□□□□□ -0.91
COL4A6-201ENST00000334504 A0A1W2PQY0 241 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 MEIS3P2A8K0S8 358 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 HPGDSO60760 199 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 CNR2P34972 360 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 MEF2AQ02078 507 aaPredicted RBP9.37□□□□□ -0.91
COL4A6-201ENST00000334504 PTPRCAPQ14761 206 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 FLYWCH1Q4VC44 716 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 TMIGD1Q6UXZ0 262 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.37□□□□□ -0.91
COL4A6-201ENST00000334504 RASGRP3Q8IV61 690 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 IQCF1Q8N6M8 205 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 APMAPQ9HDC9 416 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 MAP2P11137 1827 aaKnown RBP9.37□□□□□ -0.91
COL4A6-201ENST00000334504 FAM230AA0A1W2PPH8 454 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 TNFRSF10AO00220 468 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 IRAK2O43187 625 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 NFATC1O95644 943 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 MMP3P08254 477 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 ARAFP10398 606 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 MTNR1AP48039 350 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 ERVK-21P61565 698 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 TAGLNQ01995 201 aaKnown RBP9.37□□□□□ -0.91
COL4A6-201ENST00000334504 BEX5Q5H9J7 111 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 ZNF425Q6IV72 752 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 RGMBQ6NW40 437 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 ZNF585AQ6P3V2 769 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 P4HA3Q7Z4N8 544 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 SLC22A18Q96BI1 424 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 KLHL21Q9UJP4 597 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 RIPK3Q9Y572 518 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 PCDHAC2Q9Y5I4 1007 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 NAP1L6A6NFF2 107 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 TRIM23P36406 574 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 INHBEP58166 350 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 TAS2R20P59543 309 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 POU6F2P78424 691 aaPredicted RBP9.37□□□□□ -0.91
COL4A6-201ENST00000334504 SPRED3Q2MJR0 410 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 DPY19L4Q7Z388 723 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 ZFP82Q8N141 532 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 ZNF514Q96K75 400 aaPredicted RBP9.37□□□□□ -0.91
COL4A6-201ENST00000334504 TGM7Q96PF1 710 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 SLC7A11Q9UPY5 501 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 ZNF175Q9Y473 711 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 RIMBP3CA6NJZ7 1639 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 RIMBP3BA6NNM3 1639 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 RIMBP3Q9UFD9 1639 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 MEIS3P1A6NDR6 274 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 B4GALT2O60909 372 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 TXNDC12O95881 172 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 ACVRL1P37023 503 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 SPCS2Q15005 226 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 UNC50Q53HI1 259 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 AVPI1Q5T686 147 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 FAM69AQ5T7M9 428 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 AWAT2Q6E213 333 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 BLOC1S3Q6QNY0 202 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 SUSD1Q6UWL2 747 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 GDPD4Q6W3E5 623 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 CDHR3Q6ZTQ4 885 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 NLRP8Q86W28 1048 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 ZFAND4Q86XD8 727 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 GATSQ8NAP1 163 aa9.37□□□□□ -0.91
COL4A6-201ENST00000334504 AKR1C2P52895 323 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 CSNK2A1P68400 391 aaPredicted RBP9.36□□□□□ -0.91
COL4A6-201ENST00000334504 EIF2B1Q14232 305 aaKnown RBP9.36□□□□□ -0.91
COL4A6-201ENST00000334504 TECRLQ5HYJ1 363 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 LRIF1Q5T3J3 769 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 PLBD1Q6P4A8 553 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 BORAQ6PGQ7 559 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 ZNF783Q6ZMS7 281 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 CHCHD4Q8N4Q1 142 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 CSNK2A3Q8NEV1 391 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 OR2AP1Q8NGE2 309 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 SUN3Q8TAQ9 357 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 HMGB4Q8WW32 186 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 FAM46AQ96IP4 442 aaKnown RBP9.36□□□□□ -0.91
COL4A6-201ENST00000334504 ZNF442Q9H7R0 627 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms