RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 FHP07954 510 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 GDF10P55107 478 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 GPR176Q14439 515 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 TSSK4Q6SA08 328 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 STT3BQ8TCJ2 826 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 C2orf92A0A1B0GVN3 265 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 C1orf226A1L170 272 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 ONECUT3O60422 494 aaPredicted RBP5.28□□□□□ -1.56
PTPRB-202ENST00000334414 SNCGO76070 127 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 SMIM10L2AP0DMW4 78 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 SMIM10L2BP0DMW5 78 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 G6PDP11413 515 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 FGF3P11487 239 aaPredicted RBP5.28□□□□□ -1.56
PTPRB-202ENST00000334414 TAS2R39P59534 338 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 MICAQ29983 383 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 TANGO2Q6ICL3 276 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 MTERF1Q99551 399 aaKnown RBP5.28□□□□□ -1.56
PTPRB-202ENST00000334414 WDR18Q9BV38 432 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 ZCCHC3Q9NUD5 404 aaKnown RBP5.28□□□□□ -1.56
PTPRB-202ENST00000334414 DTLQ9NZJ0 730 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 NCDNQ9UBB6 729 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 NLKQ9UBE8 527 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 RNF150Q9ULK6 438 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 SCML1Q9UN30 329 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 KLK4Q9Y5K2 254 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 NAV1Q8NEY1 1877 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 ZBTB7AO95365 584 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 APODP05090 189 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 PFKLP17858 780 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 GABRA5P31644 462 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 SNCAP37840 140 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 VASH1Q7L8A9 365 aaPredicted RBP5.28□□□□□ -1.56
PTPRB-202ENST00000334414 OTOP3Q7RTS5 596 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 KIAA0907Q7Z7F0 614 aaPredicted RBP5.28□□□□□ -1.56
PTPRB-202ENST00000334414 FAM129CQ86XR2 697 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 MFSD6LQ8IWD5 586 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 KCNRGQ8N5I3 272 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 PTCHD1Q96NR3 888 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 TUBG2Q9NRH3 451 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 SLC17A6Q9P2U8 582 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 ADRB1P08588 477 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 CELP19835 753 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 CASP3P42574 277 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 SMAD3P84022 425 aaKnown RBP5.28□□□□□ -1.56
PTPRB-202ENST00000334414 MALLQ13021 153 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 SERINC3Q13530 473 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 CHRNA6Q15825 494 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 GFOD2Q3B7J2 385 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 KIAA0319Q5VV43 1072 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF691Q5VV52 312 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 OR4F3Q6IEY1 312 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 SLC8B1Q6J4K2 584 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 DPY19L4Q7Z388 723 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 TMEM150AQ86TG1 271 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 ZC3H3Q8IXZ2 948 aaKnown RBP5.28□□□□□ -1.56
PTPRB-202ENST00000334414 TRAM1L1Q8N609 369 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 PXT1Q8NFP0 134 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 PKP4Q99569 1192 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 CPNE7Q9UBL6 633 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 SPO11Q9Y5K1 396 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 LRRC37A3O60309 1634 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 MOXD2PA6NHM9 499 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 MEIS2O14770 477 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 RHOP08100 348 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 SNHG28P0DPA3 235 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 GAAP10253 952 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 STEAP4Q687X5 459 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 SSX7Q7RTT5 188 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 VTCN1Q7Z7D3 282 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 C15orf54Q8N8G6 183 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 STEAP2Q8NFT2 490 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 ACOT11Q8WXI4 607 aaPredicted RBP5.28□□□□□ -1.56
PTPRB-202ENST00000334414 DGAT2Q96PD7 388 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 PCED1AQ9H1Q7 454 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 CLEC4EQ9ULY5 219 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 SOCS5O75159 536 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 RHBDL3P58872 404 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 EIF2B1Q14232 305 aaKnown RBP5.28□□□□□ -1.56
PTPRB-202ENST00000334414 SLBPQ14493 270 aaKnown RBP eCLIP5.28□□□□□ -1.56
PTPRB-202ENST00000334414 SPCS2Q15005 226 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 ZMAT1Q5H9K5 638 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 LYRM7Q5U5X0 104 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 SLC30A7Q8NEW0 376 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 OR7D4Q8NG98 312 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 OR4K1Q8NGD4 311 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 LAMB4A4D0S4 1761 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 A0A1W2PPL8 197 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF850A8MQ14 1090 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 ANGPTL7O43827 346 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 AKR1C4P17516 323 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 FXYD6P3P58550 94 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 UBXN2BQ14CS0 331 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 ATXN7L3Q14CW9 347 aaPredicted RBP5.28□□□□□ -1.56
PTPRB-202ENST00000334414 OR10K2Q6IF99 312 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 OR6V1Q8N148 313 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 KLHDC1Q8N7A1 406 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 SLAMF9Q96A28 289 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 QRSL1Q9H0R6 528 aaKnown RBP5.28□□□□□ -1.56
PTPRB-202ENST00000334414 RNF181Q9P0P0 153 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 SEPT4O43236 478 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms