RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 LAMTOR1Q6IAA8 161 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 LHFPL3Q86UP9 236 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 OR2A12Q8NGT7 310 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 TMED9Q9BVK6 235 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 TBC1D17Q9HA65 648 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 MRPL17Q9NRX2 175 aaKnown RBP22.32■■□□□ 1.16
TSKU-201ENST00000333090 INSL5Q9Y5Q6 135 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 PLXND1Q9Y4D7 1925 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 ORC5O43913 435 aa22.31■■□□□ 1.16
TSKU-201ENST00000333090 MMP20O60882 483 aa22.31■■□□□ 1.16
TSKU-201ENST00000333090 GJA1P17302 382 aa22.31■■□□□ 1.16
TSKU-201ENST00000333090 EVI2BP34910 448 aa22.31■■□□□ 1.16
TSKU-201ENST00000333090 RECQLP46063 649 aaPredicted RBP22.31■■□□□ 1.16
TSKU-201ENST00000333090 RAB40BQ12829 278 aa22.31■■□□□ 1.16
TSKU-201ENST00000333090 COX10Q12887 443 aa22.31■■□□□ 1.16
TSKU-201ENST00000333090 ZNF57Q68EA5 555 aaPredicted RBP22.31■■□□□ 1.16
TSKU-201ENST00000333090 ASTLQ6HA08 431 aaPredicted RBP22.31■■□□□ 1.16
TSKU-201ENST00000333090 CCDC28AQ8IWP9 274 aa22.31■■□□□ 1.16
TSKU-201ENST00000333090 REM2Q8IYK8 340 aaPredicted RBP22.31■■□□□ 1.16
TSKU-201ENST00000333090 SOSTQ9BQB4 213 aa22.31■■□□□ 1.16
TSKU-201ENST00000333090 TMEM43Q9BTV4 400 aa22.31■■□□□ 1.16
TSKU-201ENST00000333090 ACAT2Q9BWD1 397 aa22.31■■□□□ 1.16
TSKU-201ENST00000333090 EGLN3Q9H6Z9 239 aa22.31■■□□□ 1.16
TSKU-201ENST00000333090 PDPK1O15530 556 aa22.31■■□□□ 1.16
TSKU-201ENST00000333090 EVX1P49640 407 aa22.31■■□□□ 1.16
TSKU-201ENST00000333090 ABATP80404 500 aa22.31■■□□□ 1.16
TSKU-201ENST00000333090 UBE3AQ05086 875 aa22.31■■□□□ 1.16
TSKU-201ENST00000333090 MAB21L1Q13394 359 aa22.31■■□□□ 1.16
TSKU-201ENST00000333090 SLC25A30Q5SVS4 291 aa22.31■■□□□ 1.16
TSKU-201ENST00000333090 OR5P2Q8WZ92 322 aa22.31■■□□□ 1.16
TSKU-201ENST00000333090 LMLNQ96KR4 655 aa22.31■■□□□ 1.16
TSKU-201ENST00000333090 ATF6BQ99941 703 aa22.31■■□□□ 1.16
TSKU-201ENST00000333090 WACQ9BTA9 647 aa22.31■■□□□ 1.16
TSKU-201ENST00000333090 GTPBP2Q9BX10 602 aaKnown RBP22.31■■□□□ 1.16
TSKU-201ENST00000333090 SGPP1Q9BX95 441 aa22.31■■□□□ 1.16
TSKU-201ENST00000333090 A0A1W2PRQ8 180 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 GRM6O15303 877 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 PRODHO43272 600 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 TSC22D2O75157 780 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 ACADMP11310 421 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 DDCP20711 480 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 IFNA8P32881 189 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 MTNR1AP48039 350 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 SMSP52788 366 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 MAPK12P53778 367 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 MRPL28Q13084 256 aaKnown RBP22.3■■□□□ 1.16
TSKU-201ENST00000333090 INSL4Q14641 139 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 ZNF767PQ75MW2 155 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 GAREM2Q75VX8 874 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 SLC9B2Q86UD5 537 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 ADGRF3Q8IZF5 1079 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 CLIP3Q96DZ5 547 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 FAM83CQ9BQN1 747 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 MARVELD1Q9BSK0 173 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 NOS1APO75052 506 aaPredicted RBP22.3■■□□□ 1.16
TSKU-201ENST00000333090 LEFTY1O75610 366 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 EFEMP2O95967 443 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 FGF9P31371 208 aaPredicted RBP22.3■■□□□ 1.16
TSKU-201ENST00000333090 CTBP2P56545 445 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 CDK5Q00535 292 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 TLE2Q04725 743 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 CREB3L2Q70SY1 520 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 SIX5Q8N196 739 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 SLC43A3Q8NBI5 491 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 XAGE5Q8WWM1 108 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 EXOSC8Q96B26 276 aaKnown RBP22.3■■□□□ 1.16
TSKU-201ENST00000333090 CLCA2Q9UQC9 943 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 LALBAP00709 142 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 LIMS3P0CW19 117 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 LIMS4P0CW20 117 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 OR5D16Q8NGK9 328 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 MRPS31Q92665 395 aaKnown RBP22.3■■□□□ 1.16
TSKU-201ENST00000333090 FGF11Q92914 225 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 AP2M1Q96CW1 435 aa22.3■■□□□ 1.16
TSKU-201ENST00000333090 OTUB1Q96FW1 271 aaPredicted RBP22.3■■□□□ 1.16
TSKU-201ENST00000333090 SENP5Q96HI0 755 aaPredicted RBP22.3■■□□□ 1.16
TSKU-201ENST00000333090 ZNF717Q9BY31 904 aaPredicted RBP22.3■■□□□ 1.16
TSKU-201ENST00000333090 MEN1O00255 615 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 RFXAPO00287 272 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 PLPP1O14494 284 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 NRG2O14511 850 aaPredicted RBP22.29■■□□□ 1.16
TSKU-201ENST00000333090 UQCRC1P31930 480 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 MAPK9P45984 424 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 SPOUT1Q5T280 376 aaKnown RBP22.29■■□□□ 1.16
TSKU-201ENST00000333090 AMIGO1Q86WK6 493 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 MARCH9Q86YJ5 346 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 CRIPAKQ8N1N5 446 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 SLC37A3Q8NCC5 494 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 OR9A1PQ8NGU1 263 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 NEIL3Q8TAT5 605 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 ARHGAP9Q9BRR9 750 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 FGF20Q9NP95 211 aaPredicted RBP22.29■■□□□ 1.16
TSKU-201ENST00000333090 MAN2C1Q9NTJ4 1040 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 SHISA3A0PJX4 238 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 INMT-MINDY4F8WBC2 141 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 SLC43A1O75387 559 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 SOD1P00441 154 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 EFNB1P98172 346 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 SF3A2Q15428 464 aaKnown RBP22.29■■□□□ 1.16
TSKU-201ENST00000333090 NDUFA9Q16795 377 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms