RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 GRPRP30550 384 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 MAZP56270 477 aaKnown RBP11.2□□□□□ -0.62
DDR1-223ENST00000324771 LGALS3BPQ08380 585 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 CLCA4Q14CN2 919 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 TRAM2Q15035 370 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 GFOD2Q3B7J2 385 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 LRIT3Q3SXY7 679 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 SPATS1Q496A3 300 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 CEP78Q5JTW2 689 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 FAM111BQ6SJ93 734 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 TMPRSS9Q7Z410 1059 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 OR1E3Q8WZA6 343 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 RFKQ969G6 155 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 MAPKAP1Q9BPZ7 522 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 GORASP2Q9H8Y8 452 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 COPS7AQ9UBW8 275 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 TNS1Q9HBL0 1735 aaKnown RBP11.2□□□□□ -0.62
DDR1-223ENST00000324771 GFYI3L273 518 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 ACOX3O15254 700 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 PRAMEF10O60809 474 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 CPNE3O75131 537 aaKnown RBP11.2□□□□□ -0.62
DDR1-223ENST00000324771 ALPLP05186 524 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 PORP16435 677 aaPredicted RBP11.2□□□□□ -0.62
DDR1-223ENST00000324771 RHCEP18577 417 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 NAA10P41227 235 aaPredicted RBP11.2□□□□□ -0.62
DDR1-223ENST00000324771 GCGRP47871 477 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 TXNL4AP83876 142 aaKnown RBP11.2□□□□□ -0.62
DDR1-223ENST00000324771 TIAL1Q01085 375 aaKnown RBP eCLIP11.2□□□□□ -0.62
DDR1-223ENST00000324771 GPR19Q15760 415 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 RBM45Q8IUH3 476 aaKnown RBP11.2□□□□□ -0.62
DDR1-223ENST00000324771 OR9A4Q8NGU2 314 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 ZDHHC1Q8WTX9 485 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 ZFYVE21Q9BQ24 234 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 KLHL31Q9H511 634 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 USP36Q9P275 1121 aaKnown RBP11.2□□□□□ -0.62
DDR1-223ENST00000324771 MED31Q9Y3C7 131 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 ATG4BQ9Y4P1 393 aa11.2□□□□□ -0.62
DDR1-223ENST00000324771 FAM240BA0A1B0GVZ2 78 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 CDC14CA4D256 554 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 FAM171A2A8MVW0 826 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 C11orf98E9PRG8 122 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 RNASET2O00584 256 aaKnown RBP11.19□□□□□ -0.62
DDR1-223ENST00000324771 SCO2O43819 266 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 ARRB1P49407 418 aaPredicted RBP11.19□□□□□ -0.62
DDR1-223ENST00000324771 CSNK1EP49674 416 aaKnown RBP11.19□□□□□ -0.62
DDR1-223ENST00000324771 BMXP51813 675 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 POU6F2P78424 691 aaPredicted RBP11.19□□□□□ -0.62
DDR1-223ENST00000324771 ABATP80404 500 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 MAT1AQ00266 395 aaKnown RBP11.19□□□□□ -0.62
DDR1-223ENST00000324771 C1QTNF12Q5T7M4 302 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 SERPINA11Q86U17 422 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 VRK2Q86Y07 508 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 PIK3R3Q92569 461 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 MRPL48Q96GC5 212 aaKnown RBP11.19□□□□□ -0.62
DDR1-223ENST00000324771 LYSMD1Q96S90 227 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 TAS2R16Q9NYV7 291 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 KLHL42Q9P2K6 505 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 TBC1D29Q9UFV1 150 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 FAM183AA6NL82 134 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 OR2B3O76000 313 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 SLC5A2P31639 672 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 BMP8BP34820 402 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 SLC19A1P41440 591 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 PPP2CBP62714 309 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 PPP2CAP67775 309 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 PHC1P78364 1004 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 ZNF385BQ569K4 471 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 GTF2IRD2BQ6EKJ0 949 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 BCDIN3DQ7Z5W3 292 aaKnown RBP11.19□□□□□ -0.62
DDR1-223ENST00000324771 BMP8AQ7Z5Y6 402 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 GTF2IRD2Q86UP8 949 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 OR56A3Q8NH54 315 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 SLC38A5Q8WUX1 472 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 GATAD2BQ8WXI9 593 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 TAMM41Q96BW9 452 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 RSPRY1Q96DX4 576 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 HSPA12BQ96MM6 686 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 TREX2Q9BQ50 279 aaPredicted RBP11.19□□□□□ -0.62
DDR1-223ENST00000324771 MKKSQ9NPJ1 570 aaPredicted RBP11.19□□□□□ -0.62
DDR1-223ENST00000324771 AKAP7Q9P0M2 348 aaPredicted RBP11.19□□□□□ -0.62
DDR1-223ENST00000324771 SPATA2Q9UM82 520 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 SH2B3Q9UQQ2 575 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 CSNK1G3Q9Y6M4 447 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 PLPP1O14494 284 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 PLD2O14939 933 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 LCMT2O60294 686 aaKnown RBP11.19□□□□□ -0.62
DDR1-223ENST00000324771 CSTAP01040 98 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 CHRNEQ04844 493 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 SLC14A1Q13336 389 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 C11orf88Q6PI97 169 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 METTL4Q8N3J2 472 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 CHDHQ8NE62 594 aaPredicted RBP11.19□□□□□ -0.62
DDR1-223ENST00000324771 OR2L5Q8NG80 312 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 DMRTB1Q96MA1 342 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 SECISBP2Q96T21 854 aaKnown RBP11.19□□□□□ -0.62
DDR1-223ENST00000324771 SLITRK2Q9H156 845 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 CPNE7Q9UBL6 633 aa11.19□□□□□ -0.62
DDR1-223ENST00000324771 CNOT11Q9UKZ1 510 aaKnown RBP11.19□□□□□ -0.62
DDR1-223ENST00000324771 GPC6Q9Y625 555 aaPredicted RBP11.19□□□□□ -0.62
DDR1-223ENST00000324771 SDK2Q58EX2 2172 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms