RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 RABL3Q5HYI8 236 aa12.68□□□□□ -0.38
PRPF18-201ENST00000320054 ZCCHC12Q6PEW1 402 aa12.68□□□□□ -0.38
PRPF18-201ENST00000320054 ZNF771Q7L3S4 317 aaPredicted RBP12.68□□□□□ -0.38
PRPF18-201ENST00000320054 CLEC4FQ8N1N0 589 aa12.68□□□□□ -0.38
PRPF18-201ENST00000320054 ZNF615Q8N8J6 731 aa12.68□□□□□ -0.38
PRPF18-201ENST00000320054 MIPOL1Q8TD10 442 aa12.68□□□□□ -0.38
PRPF18-201ENST00000320054 SLC2A12Q8TD20 617 aa12.68□□□□□ -0.38
PRPF18-201ENST00000320054 SENP5Q96HI0 755 aaPredicted RBP12.68□□□□□ -0.38
PRPF18-201ENST00000320054 VPS50Q96JG6 964 aa12.68□□□□□ -0.38
PRPF18-201ENST00000320054 SLC35G5Q96KT7 338 aa12.68□□□□□ -0.38
PRPF18-201ENST00000320054 MS4A4EQ96PG1 132 aa12.68□□□□□ -0.38
PRPF18-201ENST00000320054 CDRT15Q96T59 188 aa12.68□□□□□ -0.38
PRPF18-201ENST00000320054 LPAR4Q99677 370 aa12.68□□□□□ -0.38
PRPF18-201ENST00000320054 WDR77Q9BQA1 342 aaPredicted RBP12.68□□□□□ -0.38
PRPF18-201ENST00000320054 THUMPD3Q9BV44 507 aaKnown RBP12.68□□□□□ -0.38
PRPF18-201ENST00000320054 SPATA9Q9BWV2 254 aa12.68□□□□□ -0.38
PRPF18-201ENST00000320054 CADM1Q9BY67 442 aaKnown RBP12.68□□□□□ -0.38
PRPF18-201ENST00000320054 ZNF700Q9H0M5 742 aa12.68□□□□□ -0.38
PRPF18-201ENST00000320054 MMADHCQ9H3L0 296 aaPredicted RBP12.68□□□□□ -0.38
PRPF18-201ENST00000320054 IKZF5Q9H5V7 419 aa12.68□□□□□ -0.38
PRPF18-201ENST00000320054 KAT8Q9H7Z6 458 aaKnown RBP12.68□□□□□ -0.38
PRPF18-201ENST00000320054 GPN2Q9H9Y4 310 aaPredicted RBP12.68□□□□□ -0.38
PRPF18-201ENST00000320054 GPATCH2Q9NW75 528 aa12.68□□□□□ -0.38
PRPF18-201ENST00000320054 CMTM6Q9NX76 183 aa12.68□□□□□ -0.38
PRPF18-201ENST00000320054 ERVK-19Q9WJR5 959 aa12.68□□□□□ -0.38
PRPF18-201ENST00000320054 L3MBTL1Q9Y468 752 aa12.68□□□□□ -0.38
PRPF18-201ENST00000320054 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 TTC36A6NLP5 189 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 A8MUA0 341 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 NME4O00746 187 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 SOCS6O14544 535 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 PRAMEF2O60811 474 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 SOX30O94993 753 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 IGKV3-11P04433 115 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 HMGN2P05204 90 aaKnown RBP12.67□□□□□ -0.38
PRPF18-201ENST00000320054 BMP2P12643 396 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 SPINK2P20155 84 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 HOXD11P31277 338 aaPredicted RBP12.67□□□□□ -0.38
PRPF18-201ENST00000320054 PGM1P36871 562 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 PRIM2P49643 509 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 ANXA11P50995 505 aaKnown RBP12.67□□□□□ -0.38
PRPF18-201ENST00000320054 GPR143P51810 404 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 PGDP52209 483 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 RPS18P62269 152 aaKnown RBP12.67□□□□□ -0.38
PRPF18-201ENST00000320054 SELPLGQ14242 412 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 EXOSC7Q15024 291 aaKnown RBP12.67□□□□□ -0.38
PRPF18-201ENST00000320054 RGNQ15493 299 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 SAMD4BQ5PRF9 694 aaKnown RBP12.67□□□□□ -0.38
PRPF18-201ENST00000320054 EXOSC6Q5RKV6 272 aaKnown RBP12.67□□□□□ -0.38
PRPF18-201ENST00000320054 FAM69BQ5VUD6 431 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 MFSD12Q6NUT3 480 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 PAPD4Q6PIY7 484 aaKnown RBP12.67□□□□□ -0.38
PRPF18-201ENST00000320054 PPP1R32Q7Z5V6 425 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 SERPINA11Q86U17 422 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 CALHM3Q86XJ0 350 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 NFAM1Q8NET5 270 aaPredicted RBP12.67□□□□□ -0.38
PRPF18-201ENST00000320054 B3GNT7Q8NFL0 401 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 OR1N1Q8NGS0 311 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 ZNF721Q8TF20 911 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 HOXB13Q92826 284 aaPredicted RBP12.67□□□□□ -0.38
PRPF18-201ENST00000320054 GIMAP5Q96F15 307 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 MAGED4Q96JG8 741 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 CNPPD1Q9BV87 410 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 ACTRT3Q9BYD9 372 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 SEMA4CQ9C0C4 833 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 ANKRA2Q9H9E1 313 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 ADA2Q9NZK5 511 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 CD300AQ9UGN4 299 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 DCHS1Q96JQ0 3298 aa12.67□□□□□ -0.38
PRPF18-201ENST00000320054 IGHV1-45A0A0A0MS14 117 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 OR6C76A6NM76 312 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 HRKO00198 91 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 ASNA1O43681 348 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 CREG1O75629 220 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 C1QCP02747 245 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 CLPSP04118 112 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 ADRB1P08588 477 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 COX6A1P12074 109 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 HSD17B1P14061 328 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 MATN1P21941 496 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 SSTR4P31391 388 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 MAP3K8P41279 467 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 KHKP50053 298 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 EMDP50402 254 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 GZMMP51124 257 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 PRKAG1P54619 331 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 SLC37A1P57057 533 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 EEF1A2Q05639 463 aaKnown RBP12.66□□□□□ -0.38
PRPF18-201ENST00000320054 DUSP8Q13202 625 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 PCOLCEQ15113 449 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 TGIF1Q15583 401 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 PIGGQ5H8A4 983 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 CDC73Q6P1J9 531 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 PGM2L1Q6PCE3 622 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 KIRREL2Q6UWL6 708 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 RNF111Q6ZNA4 994 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 NDUFAF7Q7L592 441 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 SZRD1Q7Z422 152 aa12.66□□□□□ -0.38
PRPF18-201ENST00000320054 NET1Q7Z628 596 aaPredicted RBP12.66□□□□□ -0.38
PRPF18-201ENST00000320054 RNF130Q86XS8 419 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms