RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 NUDT17P0C025 328 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 SMIM10L2AP0DMW4 78 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 SMIM10L2BP0DMW5 78 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 CXCL8P10145 99 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 ARF4P18085 180 aaPredicted RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 CYP2B6P20813 491 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 EFNA1P20827 205 aaPredicted RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 CTNNA2P26232 953 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 SRD5A2P31213 254 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 CHRNA3P32297 505 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 GABPB1Q06547 395 aaPredicted RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 ILF3Q12906 894 aaKnown RBP eCLIP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 CUL1Q13616 776 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 RBM39Q14498 530 aaKnown RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 TMEM132DQ14C87 1099 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 ZNF542PQ5EBM4 170 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 NADSYN1Q6IA69 706 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 ZNF771Q7L3S4 317 aaPredicted RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 CATSPER4Q7RTX7 472 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 PHLDB2Q86SQ0 1253 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 NUDCD2Q8WVJ2 157 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 SLC13A3Q8WWT9 602 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 IFT81Q8WYA0 676 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 PRCCQ92733 491 aaPredicted RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 NSL1Q96IY1 281 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 CPB2Q96IY4 423 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 ZNF354BQ96LW1 612 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 TRIM6Q9C030 488 aaPredicted RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 FAM49AQ9H0Q0 323 aaPredicted RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 RAB17Q9H0T7 212 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 C5orf66Q9H5L9 145 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 FKRPQ9H9S5 495 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 CYP3A43Q9HB55 503 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 MED4Q9NPJ6 270 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 FAM114A2Q9NRY5 505 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 HOMER3Q9NSC5 361 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 TRMT6Q9UJA5 497 aaKnown RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 ANAPC7Q9UJX3 599 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 KIAA1257Q9ULG3 409 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 UTP11Q9Y3A2 253 aaKnown RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 C2CD2Q9Y426 696 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 MROH7Q68CQ1 1323 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 A0A1W2PN81 502 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 MBLAC1A4D2B0 266 aaPredicted RBP3.61□□□□□ -1.83
SMCO3-201ENST00000316048 ANTXRLA6NF34 631 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 RAD51CO43502 376 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 PRKNO60260 465 aaPredicted RBP3.61□□□□□ -1.83
SMCO3-201ENST00000316048 HSF2BPO75031 334 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 CSDE1O75534 798 aaKnown RBP3.61□□□□□ -1.83
SMCO3-201ENST00000316048 B3GALNT1O75752 331 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 PROSCO94903 275 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 NTN1O95631 604 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 AHCYP23526 432 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 MAPK3P27361 379 aaPredicted RBP3.61□□□□□ -1.83
SMCO3-201ENST00000316048 CHRNA7P36544 502 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 MAZP56270 477 aaKnown RBP3.61□□□□□ -1.83
SMCO3-201ENST00000316048 ABRQ12979 859 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 PDE7AQ13946 482 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 WDR38Q5JTN6 314 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 SLC35D3Q5M8T2 416 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 MFSD14CQ5VZR4 134 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 DCUN1D2Q6PH85 259 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 FOXL2NBQ6ZUU3 175 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 CPEB2Q7Z5Q1 589 aaKnown RBP3.61□□□□□ -1.83
SMCO3-201ENST00000316048 ISCA2Q86U28 154 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 ERICH1Q86X53 443 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 LAX1Q8IWV1 398 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 LMNTD2Q8IXW0 634 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 EFCAB13Q8IY85 973 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 PSMA8Q8TAA3 256 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 AENQ8WTP8 325 aaKnown RBP3.61□□□□□ -1.83
SMCO3-201ENST00000316048 FCAMRQ8WWV6 532 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 HPDLQ96IR7 371 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 C4orf45Q96LM5 186 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 TSSK2Q96PF2 358 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 PRMT1Q99873 361 aaKnown RBP3.61□□□□□ -1.83
SMCO3-201ENST00000316048 C11orf70Q9BRQ4 267 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 DDX47Q9H0S4 455 aaKnown RBP3.61□□□□□ -1.83
SMCO3-201ENST00000316048 SDCBP2Q9H190 292 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 LHX5Q9H2C1 402 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 SYTL2Q9HCH5 934 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 GINS2Q9Y248 185 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 STRAPQ9Y3F4 350 aaKnown RBP3.61□□□□□ -1.83
SMCO3-201ENST00000316048 UMODL1Q5DID0 1318 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 MAGEB16A2A368 324 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 MTMR11A4FU01 709 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 SNURFLB1AK76 121 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 M0QZ92 97 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 OVOL3O00110 214 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 HAS3O00219 553 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 PSTPIP1O43586 416 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 DUSP11O75319 330 aaKnown RBP3.61□□□□□ -1.83
SMCO3-201ENST00000316048 NGFP01138 241 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 CALCAP01258 141 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 ALPPP05187 535 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 ALPPL2P10696 532 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 FGF5P12034 268 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 ALDH4A1P30038 563 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 CDH5P33151 784 aaPredicted RBP3.61□□□□□ -1.83
SMCO3-201ENST00000316048 SSR1P43307 286 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms