RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 SLC9B2Q86UD5 537 aa12.71□□□□□ -0.38
SKA3-202ENST00000314759 TMEM25Q86YD3 366 aa12.71□□□□□ -0.38
SKA3-202ENST00000314759 TCEAL8Q8IYN2 117 aa12.71□□□□□ -0.38
SKA3-202ENST00000314759 AP3S1Q92572 193 aa12.71□□□□□ -0.38
SKA3-202ENST00000314759 RBFOX1Q9NWB1 397 aaKnown RBP12.71□□□□□ -0.38
SKA3-202ENST00000314759 SEC14L3Q9UDX4 400 aa12.71□□□□□ -0.38
SKA3-202ENST00000314759 PLXNA2O75051 1894 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 OBSL1O75147 1896 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 PRAMEF27A3QJZ7 478 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 M0R3H8 397 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 LEFTY2O00292 366 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 RTCAO00442 366 aaKnown RBP12.7□□□□□ -0.38
SKA3-202ENST00000314759 SLC30A4O14863 429 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 SH3BP5O60239 455 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 EPHX1P07099 455 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 NR2F6P10588 404 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 DDCP20711 480 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 ENPP1P22413 925 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 MAPK9P45984 424 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 SLC7A9P82251 487 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 WSCD2Q2TBF2 565 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 ARSIQ5FYB1 569 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 TECPR1Q7Z6L1 1165 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 GRAMD2AQ8IUY3 354 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 FBXL6Q8N531 539 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 FBXO15Q8NCQ5 510 aaPredicted RBP12.7□□□□□ -0.38
SKA3-202ENST00000314759 C19orf18Q8NEA5 215 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 OR4K5Q8NGD3 323 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 OR8H1Q8NGG4 311 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 OR5P2Q8WZ92 322 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 MRPS31Q92665 395 aaKnown RBP12.7□□□□□ -0.38
SKA3-202ENST00000314759 QRFPRQ96P65 431 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 TREX2Q9BQ50 279 aaPredicted RBP12.7□□□□□ -0.38
SKA3-202ENST00000314759 GTPBP2Q9BX10 602 aaKnown RBP12.7□□□□□ -0.38
SKA3-202ENST00000314759 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.7□□□□□ -0.38
SKA3-202ENST00000314759 ING3Q9NXR8 418 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 FBXW2Q9UKT8 454 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 A0A1W2PRQ8 180 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 WASH3PC4AMC7 463 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 PLPP1O14494 284 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 HPGDSO60760 199 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 MMP20O60882 483 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 PDE9AO76083 593 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 TBX6O95947 436 aaPredicted RBP12.7□□□□□ -0.38
SKA3-202ENST00000314759 OR12D1P0DN82 309 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 CD79BP40259 229 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 SMIM11AP58511 58 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 CDK5Q00535 292 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 SNAPC1Q16533 368 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 KLHL22Q53GT1 634 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 CD300LDQ6UXZ3 194 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 ZFP41Q8N8Y5 198 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 DUSP18Q8NEJ0 188 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 OR9A1PQ8NGU1 263 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 ZC3HAV1LQ96H79 300 aaKnown RBP12.7□□□□□ -0.38
SKA3-202ENST00000314759 SERHL2Q9H4I8 314 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 RRAGCQ9HB90 399 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 CKAP5Q14008 2032 aa12.7□□□□□ -0.38
SKA3-202ENST00000314759 FAM240BA0A1B0GVZ2 78 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 TMEM129A0AVI4 362 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 HCN1O60741 890 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 ACADMP11310 421 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 RRAS2P62070 204 aaPredicted RBP12.69□□□□□ -0.38
SKA3-202ENST00000314759 PPP3R1P63098 170 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 COX10Q12887 443 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 SYPL1Q16563 259 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 TRIQKQ629K1 86 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 MEX3DQ86XN8 651 aaKnown RBP12.69□□□□□ -0.38
SKA3-202ENST00000314759 C9orf62Q8N4C0 152 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 C2orf73Q8N5S3 287 aaPredicted RBP12.69□□□□□ -0.38
SKA3-202ENST00000314759 TMEM163Q8TC26 289 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 AP2M1Q96CW1 435 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 RNFT2Q96EX2 444 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 DCLRE1CQ96SD1 692 aaKnown RBP12.69□□□□□ -0.38
SKA3-202ENST00000314759 PLA2G12AQ9BZM1 189 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 SIRT3Q9NTG7 399 aaPredicted RBP12.69□□□□□ -0.38
SKA3-202ENST00000314759 MAN2C1Q9NTJ4 1040 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 CASKO14936 926 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 SLC28A2O43868 658 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 ACP2P11117 423 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 ZNF250P15622 560 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 ARSBP15848 533 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 POLR2CP19387 275 aaPredicted RBP12.69□□□□□ -0.38
SKA3-202ENST00000314759 GABRA5P31644 462 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 RECQLP46063 649 aaPredicted RBP12.69□□□□□ -0.38
SKA3-202ENST00000314759 ABATP80404 500 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 TLE2Q04725 743 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 SHFQ7M4L6 423 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 OLIG3Q7RTU3 272 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 IQCHQ86VS3 1027 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 TIGD4Q8IY51 512 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 TMEM145Q8NBT3 493 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 PCNPQ8WW12 178 aaKnown RBP12.69□□□□□ -0.38
SKA3-202ENST00000314759 UFD1Q92890 307 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 TM4SF18Q96CE8 201 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 SCLYQ96I15 445 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 ZNF607Q96SK3 696 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 MTG2Q9H4K7 406 aa12.69□□□□□ -0.38
SKA3-202ENST00000314759 MRPS18AQ9NVS2 196 aaKnown RBP12.69□□□□□ -0.38
SKA3-202ENST00000314759 GLTPQ9NZD2 209 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms