RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 FAIM2Q9BWQ8 316 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 ROPN1BQ9BZX4 212 aaPredicted RBP13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 DEFB127Q9H1M4 99 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 ANKRA2Q9H9E1 313 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 ROPN1Q9HAT0 212 aaPredicted RBP13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 EHD3Q9NZN3 535 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 UTS2RQ9UKP6 389 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 ITPR2Q14571 2701 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 ANKRD33BA6NCL7 494 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 GOLGA6L10A6NI86 522 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 TMEM233B4DJY2 109 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 TRIM3O75382 744 aaPredicted RBP13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 UROSP10746 265 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 DDCP20711 480 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 TACR1P25103 407 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 PTGS2P35354 604 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 PTGDSP41222 190 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 ALDH9A1P49189 494 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 FBXW4P57775 412 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 BTKQ06187 659 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 ZNF844Q08AG5 666 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 ZNF763Q0D2J5 394 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 ART3Q13508 389 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 RPS6KA2Q15349 733 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 TNFAIP8L3Q5GJ75 292 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 SLC22A10Q63ZE4 541 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 RGS9BPQ6ZS82 235 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 GK5Q6ZS86 529 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 MRGPRGQ86SM5 289 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 CD163Q86VB7 1156 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 SRRM1Q8IYB3 904 aaKnown RBP13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 DND1Q8IYX4 353 aaKnown RBP13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 FAM109AQ8N4B1 249 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 OR52R1Q8NGF1 315 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 OR9A2Q8NGT5 310 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 SPPL2AQ8TCT8 520 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 TCP10LQ8TDR4 215 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 PHF10Q8WUB8 498 aaKnown RBP13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 HGDQ93099 445 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 PARD6BQ9BYG5 372 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 TAS2R7Q9NYW3 318 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 POLR3HQ9Y535 204 aaPredicted RBP13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 NPFFR2Q9Y5X5 522 aa13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 NCOA6Q14686 2063 aaPredicted RBP13.41□□□□□ -0.26
PPP1CA-201ENST00000312989 MYO1GB0I1T2 1018 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 ESPNB1AK53 854 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 E9PLN8 166 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 CDC40O60508 579 aaKnown RBP eCLIP13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 TRIM13O60858 407 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 SPAG7O75391 227 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 PDE9AO76083 593 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 PSMG1O95456 288 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 P04436 131 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 ANXA4P09525 319 aaPredicted RBP13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 ABOP16442 354 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 ABCD3P28288 659 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 GSTM5P46439 218 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 NNATQ16517 81 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 ARHGAP11AQ6P4F7 1023 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 NPSR1Q6W5P4 371 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 RPTNQ6XPR3 784 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 TRILQ7L0X0 811 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 CCDC116Q8IYX3 515 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 PRR22Q8IZ63 422 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 FAM76AQ8TAV0 307 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 RNF138Q8WVD3 245 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 EXOSC8Q96B26 276 aaKnown RBP13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 EGLN2Q96KS0 407 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 VSTM2LQ96N03 204 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 VKORC1Q9BQB6 163 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 TRMOQ9BU70 441 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 BRINP2Q9C0B6 783 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 UBQLN3Q9H347 655 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 MYNNQ9NPC7 610 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 SLC35C2Q9NQQ7 365 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 CNIH4Q9P003 139 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 SPRR3Q9UBC9 169 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 DNAJC15Q9Y5T4 150 aa13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 KLF2Q9Y5W3 355 aaPredicted RBP13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.4□□□□□ -0.26
PPP1CA-201ENST00000312989 DIDO1Q9BTC0 2240 aaKnown RBP13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 GNG14A0A1W2PPG7 69 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 CCDC151A5D8V7 595 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 B4DXG7 233 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 AZIN1O14977 448 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 TO15178 435 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 ABCB1P08183 1280 aaPredicted RBP13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 FGF4P08620 206 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 CT45A8P0DMV1 189 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 CT45A9P0DMV2 189 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 AGAP20933 346 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 DEKP35659 375 aaKnown RBP13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 PLGLB1Q02325 96 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 HEPACAMQ14CZ8 416 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 CT45A2Q5DJT8 189 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 ARL13AQ5H913 290 aaPredicted RBP13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 CFAP157Q5JU67 520 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 NOXRED1Q6NXP6 359 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 MTFR2Q6P444 385 aa13.39□□□□□ -0.27
PPP1CA-201ENST00000312989 SLC22A16Q86VW1 577 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms