RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 MXD1Q05195 221 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 DEFB134Q4QY38 66 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 ATAT1Q5SQI0 421 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 ZNF770Q6IQ21 691 aaPredicted RBP10.89□□□□□ -0.67
PTPN2-201ENST00000309660 USP43Q70EL4 1123 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 AMIGO1Q86WK6 493 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 VRK2Q86Y07 508 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 FRMD1Q8N878 549 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 FLCNQ8NFG4 579 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 WDR70Q9NW82 654 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 APOBEC3BQ9UH17 382 aaKnown RBP10.89□□□□□ -0.67
PTPN2-201ENST00000309660 MKLN1Q9UL63 735 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 MGAT4BQ9UQ53 548 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.89□□□□□ -0.67
PTPN2-201ENST00000309660 C2orf16Q68DN1 1984 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 KRBA1A5PL33 1030 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 FAAHO00519 579 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 KLF8O95600 359 aaPredicted RBP10.88□□□□□ -0.67
PTPN2-201ENST00000309660 PEBP1P30086 187 aaKnown RBP10.88□□□□□ -0.67
PTPN2-201ENST00000309660 SERPINB1P30740 379 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 GINS1Q14691 196 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 SNAPC1Q16533 368 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 ZNF311Q5JNZ3 666 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 TPRG1LQ5T0D9 272 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 C6orf132Q5T0Z8 1188 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 PLAG1Q6DJT9 500 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 SYCE2Q6PIF2 218 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 KBTBD8Q8NFY9 601 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 TTLQ8NG68 377 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 OR2L5Q8NG80 312 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 RASSF5Q8WWW0 418 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 ARSGQ96EG1 525 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 BCL7BQ9BQE9 202 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 C1QTNF2Q9BXJ5 285 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 NUAK2Q9H093 628 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 SRMSQ9H3Y6 488 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 PRDM7Q9NQW5 492 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 CNIH4Q9P003 139 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 OSGIN1Q9UJX0 560 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 ZNF780BQ9Y6R6 833 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 SPTBN5Q9NRC6 3674 aaKnown RBP10.88□□□□□ -0.67
PTPN2-201ENST00000309660 LINC00854A0A1B0GVQ3 168 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 MMP11P24347 488 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 PPM1FP49593 454 aaPredicted RBP10.88□□□□□ -0.67
PTPN2-201ENST00000309660 SNRPNP63162 240 aaKnown RBP10.88□□□□□ -0.67
PTPN2-201ENST00000309660 SIM1P81133 766 aaPredicted RBP10.88□□□□□ -0.67
PTPN2-201ENST00000309660 RELAQ04206 551 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 CHRNEQ04844 493 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 ANKRD54Q6NXT1 300 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 SHFQ7M4L6 423 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 CYP4Z2PQ8N1L4 340 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 NATD1Q8N6N6 113 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 POC5Q8NA72 575 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 NUP43Q8NFH3 380 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 SIPA1Q96FS4 1042 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 CEP19Q96LK0 163 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 TIMM29Q9BSF4 260 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 TSSK6Q9BXA6 273 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 C1QTNF7Q9BXJ2 289 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 EGLN3Q9H6Z9 239 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 KCND3Q9UK17 655 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 A4GNTQ9UNA3 340 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 NTNG1Q9Y2I2 539 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 VCANP13611 3396 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 PRSS38A1L453 326 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 K7EQS6 105 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 ARHGAP33O14559 1287 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 MRPS14O60783 128 aaKnown RBP10.88□□□□□ -0.67
PTPN2-201ENST00000309660 CYP7B1O75881 506 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 DLGAP3O95886 979 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 NTSR1P30989 418 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 MPIP34949 423 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 PRR5P85299 388 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 TFF2Q03403 129 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 DOC2BQ14184 412 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 ZER1Q7Z7L7 766 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 SIMC1Q8NDZ2 872 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 APOBEC4Q8WW27 367 aaKnown RBP10.88□□□□□ -0.67
PTPN2-201ENST00000309660 KLHL6Q8WZ60 621 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 OR1E3Q8WZA6 343 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 LRR1Q96L50 414 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 OR2M4Q96R27 311 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 POLR2J2Q9GZM3 115 aaKnown RBP10.88□□□□□ -0.67
PTPN2-201ENST00000309660 REV1Q9UBZ9 1251 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 CARD8Q9Y2G2 431 aa10.88□□□□□ -0.67
PTPN2-201ENST00000309660 WBP11Q9Y2W2 641 aaKnown RBP10.88□□□□□ -0.67
PTPN2-201ENST00000309660 MYL12BO14950 172 aa10.87□□□□□ -0.67
PTPN2-201ENST00000309660 PRKYO43930 277 aa10.87□□□□□ -0.67
PTPN2-201ENST00000309660 MPZL2O60487 215 aa10.87□□□□□ -0.67
PTPN2-201ENST00000309660 ZNF888P0CJ79 500 aaPredicted RBP10.87□□□□□ -0.67
PTPN2-201ENST00000309660 ACADMP11310 421 aa10.87□□□□□ -0.67
PTPN2-201ENST00000309660 POLR2CP19387 275 aaPredicted RBP10.87□□□□□ -0.67
PTPN2-201ENST00000309660 COL9A1P20849 921 aa10.87□□□□□ -0.67
PTPN2-201ENST00000309660 GSTM5P46439 218 aa10.87□□□□□ -0.67
PTPN2-201ENST00000309660 ZNF91Q05481 1191 aa10.87□□□□□ -0.67
PTPN2-201ENST00000309660 TGM3Q08188 693 aa10.87□□□□□ -0.67
PTPN2-201ENST00000309660 HYAL2Q12891 473 aa10.87□□□□□ -0.67
PTPN2-201ENST00000309660 TMEM35AQ53FP2 167 aa10.87□□□□□ -0.67
PTPN2-201ENST00000309660 ZNF542PQ5EBM4 170 aa10.87□□□□□ -0.67
PTPN2-201ENST00000309660 BHLHB9Q6PI77 547 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms