RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 C16orf78Q8WTQ4 265 aa18.21■□□□□ 0.51
PDZRN3-202ENST00000308537 KLHL29Q96CT2 875 aa18.21■□□□□ 0.51
PDZRN3-202ENST00000308537 CCDC126Q96EE4 140 aa18.21■□□□□ 0.51
PDZRN3-202ENST00000308537 CNIH4Q9P003 139 aa18.21■□□□□ 0.51
PDZRN3-202ENST00000308537 GRID1Q9ULK0 1009 aa18.21■□□□□ 0.51
PDZRN3-202ENST00000308537 EXO1Q9UQ84 846 aaKnown RBP18.21■□□□□ 0.51
PDZRN3-202ENST00000308537 NPFFR2Q9Y5X5 522 aa18.21■□□□□ 0.51
PDZRN3-202ENST00000308537 HNRNPRO43390 633 aaKnown RBP18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 NUDT17P0C025 328 aa18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 KRT15P19012 456 aa18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 KRT4P19013 534 aa18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 EMDP50402 254 aa18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 MRPS35P82673 323 aaKnown RBP18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 PCLAFQ15004 111 aa18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 RPS6KA2Q15349 733 aa18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 SPIN4Q56A73 249 aa18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 DESI1Q6ICB0 168 aa18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 TRIM46Q7Z4K8 759 aa18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 TAGAPQ8N103 731 aa18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 FAM13CQ8NE31 585 aa18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 RDH11Q8TC12 318 aa18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 SPPL2AQ8TCT8 520 aa18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 ZNF675Q8TD23 568 aa18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 AENQ8WTP8 325 aaKnown RBP18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 MARVELD3Q96A59 401 aa18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 ITPAQ9BY32 194 aa18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 ZFP64Q9NPA5 681 aa18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 PNPLA3Q9NST1 481 aa18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 MKS1Q9NXB0 559 aa18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 SPRR3Q9UBC9 169 aa18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 TNFRSF10DQ9UBN6 386 aa18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 UTS2RQ9UKP6 389 aa18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 ARHGAP21Q5T5U3 1957 aa18.2■□□□□ 0.5
PDZRN3-202ENST00000308537 GOLGA6L10A6NI86 522 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 NPIPA2E9PIF3 369 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 NPIPA3F8WFD2 350 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 AQP7O14520 342 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 CLDN14O95500 239 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 DRD2P14416 443 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 PCSK2P16519 638 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 ABCD3P28288 659 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 CCT5P48643 541 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 SMSP52788 366 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 ACSM2AQ08AH3 577 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 GXYLT1Q4G148 440 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 ACSM2BQ68CK6 577 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 RTL6Q6ICC9 239 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 PRR22Q8IZ63 422 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 OR5M3Q8NGP4 307 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 SMC6Q96SB8 1091 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 FAIM2Q9BWQ8 316 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 EBPLQ9BY08 206 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 BRINP2Q9C0B6 783 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 UBQLN3Q9H347 655 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 TP63Q9H3D4 680 aaPredicted RBP18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 ANKRA2Q9H9E1 313 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 PLLPQ9Y342 182 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 FAM215AQ9Y5M1 114 aa18.19■□□□□ 0.5
PDZRN3-202ENST00000308537 TACC2O95359 2948 aa18.18■□□□□ 0.5
PDZRN3-202ENST00000308537 ATP6AP2A0A1C7CYW4 349 aa18.18■□□□□ 0.5
PDZRN3-202ENST00000308537 OR14I1A6ND48 311 aa18.18■□□□□ 0.5
PDZRN3-202ENST00000308537 NPIPB8E9PQR5 432 aa18.18■□□□□ 0.5
PDZRN3-202ENST00000308537 COPEO14579 308 aa18.18■□□□□ 0.5
PDZRN3-202ENST00000308537 SUSD5O60279 629 aa18.18■□□□□ 0.5
PDZRN3-202ENST00000308537 NME6O75414 186 aaPredicted RBP18.18■□□□□ 0.5
PDZRN3-202ENST00000308537 ATP6AP2O75787 350 aa18.18■□□□□ 0.5
PDZRN3-202ENST00000308537 ABCB1P08183 1280 aaPredicted RBP18.18■□□□□ 0.5
PDZRN3-202ENST00000308537 CPA3P15088 417 aa18.18■□□□□ 0.5
PDZRN3-202ENST00000308537 DEKP35659 375 aaKnown RBP18.18■□□□□ 0.5
PDZRN3-202ENST00000308537 PTGDSP41222 190 aa18.18■□□□□ 0.5
PDZRN3-202ENST00000308537 KIR3DL1P43629 444 aa18.18■□□□□ 0.5
PDZRN3-202ENST00000308537 ALDH9A1P49189 494 aa18.18■□□□□ 0.5
PDZRN3-202ENST00000308537 NAA20P61599 178 aa18.18■□□□□ 0.5
PDZRN3-202ENST00000308537 KIAA0040Q15053 153 aa18.18■□□□□ 0.5
PDZRN3-202ENST00000308537 TRABD2AQ86V40 505 aa18.18■□□□□ 0.5
PDZRN3-202ENST00000308537 BANPQ8N9N5 519 aa18.18■□□□□ 0.5
PDZRN3-202ENST00000308537 HGDQ93099 445 aa18.18■□□□□ 0.5
PDZRN3-202ENST00000308537 SECISBP2Q96T21 854 aaKnown RBP18.18■□□□□ 0.5
PDZRN3-202ENST00000308537 ANGPTL4Q9BY76 406 aa18.18■□□□□ 0.5
PDZRN3-202ENST00000308537 LGALS13Q9UHV8 139 aa18.18■□□□□ 0.5
PDZRN3-202ENST00000308537 PTGDR2Q9Y5Y4 395 aa18.18■□□□□ 0.5
PDZRN3-202ENST00000308537 CASP3P42574 277 aa18.17■□□□□ 0.5
PDZRN3-202ENST00000308537 KCNJ2P63252 427 aa18.17■□□□□ 0.5
PDZRN3-202ENST00000308537 SLC10A1Q14973 349 aa18.17■□□□□ 0.5
PDZRN3-202ENST00000308537 NNATQ16517 81 aa18.17■□□□□ 0.5
PDZRN3-202ENST00000308537 LIPMQ5VYY2 423 aa18.17■□□□□ 0.5
PDZRN3-202ENST00000308537 FAM71E1Q6IPT2 247 aa18.17■□□□□ 0.5
PDZRN3-202ENST00000308537 TMEM81Q6P7N7 255 aa18.17■□□□□ 0.5
PDZRN3-202ENST00000308537 PAOXQ6QHF9 649 aa18.17■□□□□ 0.5
PDZRN3-202ENST00000308537 C10orf107Q8IVU9 208 aa18.17■□□□□ 0.5
PDZRN3-202ENST00000308537 CCDC116Q8IYX3 515 aa18.17■□□□□ 0.5
PDZRN3-202ENST00000308537 OR52R1Q8NGF1 315 aa18.17■□□□□ 0.5
PDZRN3-202ENST00000308537 OR9A2Q8NGT5 310 aa18.17■□□□□ 0.5
PDZRN3-202ENST00000308537 TREX2Q9BQ50 279 aaPredicted RBP18.17■□□□□ 0.5
PDZRN3-202ENST00000308537 GATA5Q9BWX5 397 aaPredicted RBP18.17■□□□□ 0.5
PDZRN3-202ENST00000308537 ACKR4Q9NPB9 350 aa18.17■□□□□ 0.5
PDZRN3-202ENST00000308537 QPCTLQ9NXS2 382 aa18.17■□□□□ 0.5
PDZRN3-202ENST00000308537 EHD3Q9NZN3 535 aa18.17■□□□□ 0.5
PDZRN3-202ENST00000308537 PSME2Q9UL46 239 aa18.17■□□□□ 0.5
PDZRN3-202ENST00000308537 GNG14A0A1W2PPG7 69 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms