RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 HCN4Q9Y3Q4 1203 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 EFCAB7A8K855 629 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 M0QX08 132 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 SLC28A2O43868 658 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 PEX1O43933 1283 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 JRKO75564 520 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 GCM2O75603 506 aaPredicted RBP16.4■□□□□ 0.22
KRT28-201ENST00000306658 PDE9AO76083 593 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 ATXN8OSP0DMR3 200 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 NR2F1P10589 423 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 MAOAP21397 527 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 GALNSP34059 522 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 STT3AP46977 705 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 SELENOWP63302 87 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 E2F1Q01094 437 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 MGAT2Q10469 447 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 ILKQ13418 452 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 LRRC36Q1X8D7 754 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.4■□□□□ 0.22
KRT28-201ENST00000306658 CYBRD1Q53TN4 286 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 ATAD3BQ5T9A4 648 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 OGFRL1Q5TC84 451 aaPredicted RBP16.4■□□□□ 0.22
KRT28-201ENST00000306658 MFSD12Q6NUT3 480 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 CDC73Q6P1J9 531 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 RBM44Q6ZP01 1051 aaKnown RBP16.4■□□□□ 0.22
KRT28-201ENST00000306658 FKBP9P1Q75LS8 142 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 GALNT10Q86SR1 603 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 VWA5B2Q8N398 1253 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 CLIP3Q96DZ5 547 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 CENPNQ96H22 339 aaPredicted RBP16.4■□□□□ 0.22
KRT28-201ENST00000306658 TMEM19Q96HH6 336 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 PTCHD1Q96NR3 888 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 OR7D2Q96RA2 312 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 CXorf21Q9HAI6 301 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 AKAP7Q9P0M2 348 aaPredicted RBP16.4■□□□□ 0.22
KRT28-201ENST00000306658 LIPT1Q9Y234 373 aa16.4■□□□□ 0.22
KRT28-201ENST00000306658 POLR1CO15160 346 aaPredicted RBP16.39■□□□□ 0.21
KRT28-201ENST00000306658 CBFA2T3O75081 653 aa16.39■□□□□ 0.21
KRT28-201ENST00000306658 PGM3O95394 542 aa16.39■□□□□ 0.21
KRT28-201ENST00000306658 LDLRP01130 860 aa16.39■□□□□ 0.21
KRT28-201ENST00000306658 FGF5P12034 268 aa16.39■□□□□ 0.21
KRT28-201ENST00000306658 PEX2P28328 305 aa16.39■□□□□ 0.21
KRT28-201ENST00000306658 MAN2A2P49641 1150 aa16.39■□□□□ 0.21
KRT28-201ENST00000306658 CRISP3P54108 245 aa16.39■□□□□ 0.21
KRT28-201ENST00000306658 ATP6AP1Q15904 470 aa16.39■□□□□ 0.21
KRT28-201ENST00000306658 GRAMD1BQ3KR37 738 aa16.39■□□□□ 0.21
KRT28-201ENST00000306658 MFSD4BQ5TF39 518 aa16.39■□□□□ 0.21
KRT28-201ENST00000306658 HMBOX1Q6NT76 420 aa16.39■□□□□ 0.21
KRT28-201ENST00000306658 ZCCHC12Q6PEW1 402 aa16.39■□□□□ 0.21
KRT28-201ENST00000306658 QSOX2Q6ZRP7 698 aa16.39■□□□□ 0.21
KRT28-201ENST00000306658 PRSS33Q8NF86 280 aa16.39■□□□□ 0.21
KRT28-201ENST00000306658 EME1Q96AY2 570 aa16.39■□□□□ 0.21
KRT28-201ENST00000306658 TPD52L3Q96J77 140 aa16.39■□□□□ 0.21
KRT28-201ENST00000306658 ZNF578Q96N58 590 aaPredicted RBP16.39■□□□□ 0.21
KRT28-201ENST00000306658 ZNF607Q96SK3 696 aa16.39■□□□□ 0.21
KRT28-201ENST00000306658 LRFN3Q9BTN0 628 aa16.39■□□□□ 0.21
KRT28-201ENST00000306658 DOHHQ9BU89 302 aa16.39■□□□□ 0.21
KRT28-201ENST00000306658 BDH2Q9BUT1 245 aa16.39■□□□□ 0.21
KRT28-201ENST00000306658 IRF2BPLQ9H1B7 796 aa16.39■□□□□ 0.21
KRT28-201ENST00000306658 EXD2Q9NVH0 621 aa16.39■□□□□ 0.21
KRT28-201ENST00000306658 CLDN16Q9Y5I7 305 aa16.39■□□□□ 0.21
KRT28-201ENST00000306658 C4orf47A7E2U8 309 aa16.38■□□□□ 0.21
KRT28-201ENST00000306658 TGFBR3LH3BV60 316 aa16.38■□□□□ 0.21
KRT28-201ENST00000306658 CLOCKO15516 846 aa16.38■□□□□ 0.21
KRT28-201ENST00000306658 COQ9O75208 318 aa16.38■□□□□ 0.21
KRT28-201ENST00000306658 DEAF1O75398 565 aaPredicted RBP16.38■□□□□ 0.21
KRT28-201ENST00000306658 CAPNS1P04632 268 aa16.38■□□□□ 0.21
KRT28-201ENST00000306658 IFNA16P05015 189 aa16.38■□□□□ 0.21
KRT28-201ENST00000306658 CCKBRP32239 447 aa16.38■□□□□ 0.21
KRT28-201ENST00000306658 SOX18P35713 384 aa16.38■□□□□ 0.21
KRT28-201ENST00000306658 CRYBA2P53672 197 aa16.38■□□□□ 0.21
KRT28-201ENST00000306658 SYPL1Q16563 259 aa16.38■□□□□ 0.21
KRT28-201ENST00000306658 NKG7Q16617 165 aa16.38■□□□□ 0.21
KRT28-201ENST00000306658 MINDY4Q4G0A6 757 aa16.38■□□□□ 0.21
KRT28-201ENST00000306658 ANKFN1Q8N957 763 aa16.38■□□□□ 0.21
KRT28-201ENST00000306658 OR10Q1Q8NGQ4 319 aa16.38■□□□□ 0.21
KRT28-201ENST00000306658 HSH2DQ96JZ2 352 aa16.38■□□□□ 0.21
KRT28-201ENST00000306658 ADAP2Q9NPF8 381 aa16.38■□□□□ 0.21
KRT28-201ENST00000306658 NECTIN3Q9NQS3 549 aa16.38■□□□□ 0.21
KRT28-201ENST00000306658 CALML5Q9NZT1 146 aa16.38■□□□□ 0.21
KRT28-201ENST00000306658 PCDHGB3Q9Y5G1 929 aa16.38■□□□□ 0.21
KRT28-201ENST00000306658 OR2W5A6NFC9 320 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 HYAL3O43820 417 aaPredicted RBP16.37■□□□□ 0.21
KRT28-201ENST00000306658 SERPINB7O75635 380 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 SOX30O94993 753 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 TIAF1O95411 115 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 MT-ND1P03886 318 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 CT62P0C5K7 136 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 PRAMEF8Q5VWM4 474 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 PRAMEF7Q5VXH5 474 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 KRT73Q86Y46 540 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 CDRT4Q8N9R6 151 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 RASSF5Q8WWW0 418 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 SLC9A6Q92581 669 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 TAMM41Q96BW9 452 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 OTUB1Q96FW1 271 aaPredicted RBP16.37■□□□□ 0.21
KRT28-201ENST00000306658 TREX2Q9BQ50 279 aaPredicted RBP16.37■□□□□ 0.21
KRT28-201ENST00000306658 VCXQ9H320 206 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 IL1RAPQ9NPH3 570 aa16.37■□□□□ 0.21
KRT28-201ENST00000306658 FBXO8Q9NRD0 319 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms