RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 SAV1Q9H4B6 383 aaPredicted RBP12.24□□□□□ -0.45
COL3A1-201ENST00000304636 RDH14Q9HBH5 336 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 MRPL15Q9P015 296 aaKnown RBP12.24□□□□□ -0.45
COL3A1-201ENST00000304636 KLHL21Q9UJP4 597 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 KCNK6Q9Y257 313 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 A0A1W2PQ09 198 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 NAP1L6A6NFF2 107 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 EIF1AYO14602 144 aaKnown RBP12.24□□□□□ -0.45
COL3A1-201ENST00000304636 LEFTY1O75610 366 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 PAK4O96013 591 aaPredicted RBP12.24□□□□□ -0.45
COL3A1-201ENST00000304636 GP1BBP13224 206 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 MAGEA3P43357 314 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 EIF1AXP47813 144 aaKnown RBP12.24□□□□□ -0.45
COL3A1-201ENST00000304636 SLAMF1Q13291 335 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 MAVSQ7Z434 540 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 PROKR1Q8TCW9 393 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 CNOT9Q92600 299 aaKnown RBP12.24□□□□□ -0.45
COL3A1-201ENST00000304636 FAM46AQ96IP4 442 aaKnown RBP12.24□□□□□ -0.45
COL3A1-201ENST00000304636 LRIG1Q96JA1 1093 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 BOCQ9BWV1 1114 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 MROQ9BYG7 248 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 NT5DC2Q9H857 520 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 GPR52Q9Y2T5 361 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 GXYLT2A0PJZ3 443 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 C2orf78A6NCI8 922 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 ZNF705EA8MWA4 302 aaPredicted RBP12.24□□□□□ -0.45
COL3A1-201ENST00000304636 GJA1P17302 382 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 SDC1P18827 310 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 AK4P27144 223 aaPredicted RBP12.24□□□□□ -0.45
COL3A1-201ENST00000304636 GPR143P51810 404 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 LMAN2Q12907 356 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 TMEM205Q6UW68 189 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 COMMD6Q7Z4G1 85 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 MCEMP1Q8IX19 187 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 LSMEM2Q8N112 164 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 NTMT1Q9BV86 223 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 PADI2Q9Y2J8 665 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 SPO11Q9Y5K1 396 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 AHSA1O95433 338 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 BMP4P12644 408 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 ZXDBP98169 803 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 WDR45BQ5MNZ6 344 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 CBLL1Q75N03 491 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 ATOH8Q96SQ7 321 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 TMEM168Q9H0V1 697 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 RGCCQ9H4X1 137 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 CLMPQ9H6B4 373 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 ARNT2Q9HBZ2 717 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 DHDHQ9UQ10 334 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 A0A1W2PQ45 241 aaPredicted RBP12.23□□□□□ -0.45
COL3A1-201ENST00000304636 A0A1W2PQY0 241 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 GLTPD2A6NH11 291 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 LATS1O95835 1130 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 APOFQ13790 326 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 TMEM35AQ53FP2 167 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 TMEM107Q6UX40 140 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 SLC29A4Q7RTT9 530 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 PRSS58Q8IYP2 241 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 ACVR1CQ8NER5 493 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 HCAR2Q8TDS4 363 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 GGHQ92820 318 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 TESCQ96BS2 214 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 S100PBPQ96BU1 408 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 OR51J1Q9H342 316 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 SEC61A2Q9H9S3 476 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 ERVK-19Q9WJR5 959 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 FZD9O00144 591 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 TFP02787 698 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 ASGR2P07307 311 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 SMIM18P0DKX4 95 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 SRCP12931 536 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 PRKXP51817 358 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 TAS2R38P59533 333 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 GSTM4Q03013 218 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 RAB40BQ12829 278 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 ATAD3CQ5T2N8 411 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 HACD4Q5VWC8 232 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 PLBD1Q6P4A8 553 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 SHFQ7M4L6 423 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 SLAIN1Q8ND83 568 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 C7orf34Q96L11 122 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 G6PC3Q9BUM1 346 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 KCNK12Q9HB15 430 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 RXFP3Q9NSD7 469 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 NAV1Q8NEY1 1877 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 PPP6CO00743 305 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 ZNF623O75123 536 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 SC5DO75845 299 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 OAZ2O95190 189 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 IL1AP01583 271 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 DRD5P21918 477 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 GLP1RP43220 463 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 RGS19P49795 217 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 GHRHRQ02643 423 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 ITPRIPL2Q3MIP1 535 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 CELF5Q8N6W0 485 aaKnown RBP12.23□□□□□ -0.45
COL3A1-201ENST00000304636 SIMC1Q8NDZ2 872 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 RELTQ969Z4 430 aa12.23□□□□□ -0.45
COL3A1-201ENST00000304636 THAP7Q9BT49 309 aaPredicted RBP12.23□□□□□ -0.45
COL3A1-201ENST00000304636 SDHAF3Q9NRP4 125 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms