RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 LRIT2A6NDA9 550 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 CCRL2O00421 344 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 MID1O15344 667 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 LCMT2O60294 686 aaKnown RBP13.39□□□□□ -0.27
RAB40A-201ENST00000304236 UPK1BO75841 260 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 KAT7O95251 611 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 OR12D1P0DN82 309 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 NR2F1P10589 423 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 SDHBP21912 280 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 CSTF2P33240 577 aaKnown RBP eCLIP13.39□□□□□ -0.27
RAB40A-201ENST00000304236 ABATP80404 500 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 CCINQ13939 588 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 SLC9A5Q14940 896 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 CST6Q15828 149 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 ZIC1Q15915 447 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 RNLSQ5VYX0 342 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 C12orf73Q69YU5 71 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 CD300LDQ6UXZ3 194 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 DEF8Q6ZN54 512 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 Q6ZS52 159 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 TRIM69Q86WT6 500 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 IL17RCQ8NAC3 791 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 OR8J1Q8NGP2 316 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 KLHL6Q8WZ60 621 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 AMDHD1Q96NU7 426 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 BBS4Q96RK4 519 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 TREX2Q9BQ50 279 aaPredicted RBP13.39□□□□□ -0.27
RAB40A-201ENST00000304236 POLR2J3Q9H1A7 115 aaKnown RBP13.39□□□□□ -0.27
RAB40A-201ENST00000304236 OR51E2Q9H255 320 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 OR51I1Q9H343 314 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 GLIPR2Q9H4G4 154 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 C5AR2Q9P296 337 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 SLC9A8Q9Y2E8 581 aa13.39□□□□□ -0.27
RAB40A-201ENST00000304236 A0A1W2PRQ8 180 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 CHURC1-FNTBB4DL54 471 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 DSCR3O14972 297 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 UGT2B17O75795 530 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 HSMCR30P0CW71 290 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 C5AR1P21730 350 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 PKLRP30613 574 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 GRK5P34947 590 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 GJA4P35212 333 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 FNTBP49356 437 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 CRISP3P54108 245 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 RPS3AP61247 264 aaKnown RBP13.38□□□□□ -0.27
RAB40A-201ENST00000304236 CDC20Q12834 499 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 SEC23BQ15437 767 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 MED22Q15528 200 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 TPRG1LQ5T0D9 272 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 NDUFAF5Q5TEU4 345 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 PRAMEF8Q5VWM4 474 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 PRAMEF7Q5VXH5 474 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 PGBD2Q6P3X8 592 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 GDPGP1Q6ZNW5 385 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 OR2A1Q8NGT9 310 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 WDR36Q8NI36 951 aaKnown RBP13.38□□□□□ -0.27
RAB40A-201ENST00000304236 TMEM80Q96HE8 168 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 FUZQ9BT04 418 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 CDADC1Q9BWV3 514 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 C6orf62Q9GZU0 229 aaPredicted RBP13.38□□□□□ -0.27
RAB40A-201ENST00000304236 SERHL2Q9H4I8 314 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 ARMC7Q9H6L4 198 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 MVB12BQ9H7P6 319 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 MBNL1Q9NR56 388 aaKnown RBP13.38□□□□□ -0.27
RAB40A-201ENST00000304236 ZCCHC3Q9NUD5 404 aaKnown RBP13.38□□□□□ -0.27
RAB40A-201ENST00000304236 DLL3Q9NYJ7 618 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 HCN2Q9UL51 889 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 CFL2Q9Y281 166 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 STON1Q9Y6Q2 735 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 GPR179Q6PRD1 2367 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 PNMA8CA0A1B0GUJ8 204 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 K7ESF4 209 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 M0R129 80 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 KDM1AO60341 852 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 ENTPD6O75354 484 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 MED26O95402 600 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 SERPIND1P05546 499 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 ACP5P13686 325 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 FUT4P22083 530 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 AHRP35869 848 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 KRT33BQ14525 404 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 IRF4Q15306 451 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 SYPL1Q16563 259 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 OCLNQ16625 522 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 TSTQ16762 297 aaKnown RBP13.38□□□□□ -0.27
RAB40A-201ENST00000304236 RSPO4Q2I0M5 234 aaPredicted RBP13.38□□□□□ -0.27
RAB40A-201ENST00000304236 NLGN4XQ8N0W4 816 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 HDDC3Q8N4P3 179 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 SRFBP1Q8NEF9 429 aaKnown RBP13.38□□□□□ -0.27
RAB40A-201ENST00000304236 VANGL1Q8TAA9 524 aaPredicted RBP13.38□□□□□ -0.27
RAB40A-201ENST00000304236 XAGE5Q8WWM1 108 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 NR4A3Q92570 626 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 NRTNQ99748 197 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 CHCHD6Q9BRQ6 235 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 CPNE5Q9HCH3 593 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 MRPS30Q9NP92 439 aaKnown RBP13.38□□□□□ -0.27
RAB40A-201ENST00000304236 TRPC4Q9UBN4 977 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 SLC6A14Q9UN76 642 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 A4GNTQ9UNA3 340 aa13.38□□□□□ -0.27
RAB40A-201ENST00000304236 WDR37Q9Y2I8 494 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms