RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 TIMP2P16035 220 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 CASP3P42574 277 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 GSTM4Q03013 218 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 C6orf132Q5T0Z8 1188 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 PARS2Q7L3T8 475 aaKnown RBP12.62□□□□□ -0.39
CASC4-201ENST00000299957 TRAM1L1Q8N609 369 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 CCDC115Q96NT0 180 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 GAL3ST4Q96RP7 486 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 USP36Q9P275 1121 aaKnown RBP12.62□□□□□ -0.39
CASC4-201ENST00000299957 PPIEQ9UNP9 301 aaKnown RBP12.62□□□□□ -0.39
CASC4-201ENST00000299957 B4GALT2O60909 372 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 DNAJB5O75953 348 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 IL7P13232 177 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 POLR2CP19387 275 aaPredicted RBP12.62□□□□□ -0.39
CASC4-201ENST00000299957 MC3RP41968 323 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 METAP1P53582 386 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 SYT6Q5T7P8 510 aaPredicted RBP12.62□□□□□ -0.39
CASC4-201ENST00000299957 GLCCI1Q86VQ1 547 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 TOMM5Q8N4H5 51 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 ZNF655Q8N720 491 aaPredicted RBP12.62□□□□□ -0.39
CASC4-201ENST00000299957 C1orf216Q8TAB5 229 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 TREX2Q9BQ50 279 aaPredicted RBP12.62□□□□□ -0.39
CASC4-201ENST00000299957 NEUROD4Q9HD90 331 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 SIPA1L1O43166 1804 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 OR2A25A4D2G3 310 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 BLOC1S5-TXNDC5H3BN57 136 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 CHST10O43529 356 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 MPC1LP0DKB6 136 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 IL1RNP18510 177 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 PCGF2P35227 344 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 AKR1D1P51857 326 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 LGALS3BPQ08380 585 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 PIP5KL1Q5T9C9 394 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 AGAP6Q5VW22 663 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 GDPD3Q7L5L3 318 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 CEACAM19Q7Z692 300 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 DNAJC5GQ8N7S2 189 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 SMAP2Q8WU79 429 aaPredicted RBP12.62□□□□□ -0.39
CASC4-201ENST00000299957 TANKQ92844 425 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 DUS3LQ96G46 650 aaKnown RBP12.62□□□□□ -0.39
CASC4-201ENST00000299957 SAMD8Q96LT4 415 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 AGAP4Q96P64 663 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 PKMYT1Q99640 499 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 SULT1C4O75897 302 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 ST3GAL3Q11203 375 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 ZNHIT3Q15649 155 aaPredicted RBP12.61□□□□□ -0.39
CASC4-201ENST00000299957 SLC46A3Q7Z3Q1 461 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 PTOV1Q86YD1 416 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 ZNF557Q8N988 423 aaPredicted RBP12.61□□□□□ -0.39
CASC4-201ENST00000299957 SLC35B4Q969S0 331 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 ZNF689Q96CS4 500 aaPredicted RBP12.61□□□□□ -0.39
CASC4-201ENST00000299957 HRASLS5Q96KN8 279 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 DUSP21Q9H596 190 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 PLSCR3Q9NRY6 295 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 FBXL12Q9NXK8 326 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 STUB1Q9UNE7 303 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 RAD1O60671 282 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 EPCAMP16422 314 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 GPX2P18283 190 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 EIF2DP41214 584 aaKnown RBP12.61□□□□□ -0.39
CASC4-201ENST00000299957 TAP2Q03519 686 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 FGFBP1Q14512 234 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 DHCR24Q15392 516 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 BICRALQ6AI39 1079 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 PDZD3Q86UT5 571 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 NUP43Q8NFH3 380 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 DYNC2LI1Q8TCX1 351 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 RBM18Q96H35 190 aaKnown RBP12.61□□□□□ -0.39
CASC4-201ENST00000299957 DPH1Q9BZG8 443 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 RDH14Q9HBH5 336 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 POLR1DQ9Y2S0 133 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 COL11A2P13942 1736 aaPredicted RBP12.61□□□□□ -0.39
CASC4-201ENST00000299957 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.61□□□□□ -0.39
CASC4-201ENST00000299957 PTTG1O95997 202 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 CERS1P27544 350 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 CMPK1P30085 196 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 OR12D2P58182 307 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 RBBP4Q09028 425 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 RPA4Q13156 261 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 TBCEQ15813 527 aaPredicted RBP12.61□□□□□ -0.39
CASC4-201ENST00000299957 SLC16A12Q6ZSM3 486 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 USP51Q70EK9 711 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 VRK2Q86Y07 508 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 ELMOD2Q8IZ81 293 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 PIAS4Q8N2W9 510 aaPredicted RBP12.61□□□□□ -0.39
CASC4-201ENST00000299957 OR9A2Q8NGT5 310 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 OR52P1PQ8NH57 321 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 LRRC20Q8TCA0 184 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 ZNF431Q8TF32 576 aaPredicted RBP12.61□□□□□ -0.39
CASC4-201ENST00000299957 TNFAIP8L1Q8WVP5 186 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 OR5P2Q8WZ92 322 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 GSDMCQ9BYG8 508 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 BHLHE41Q9C0J9 482 aaPredicted RBP12.61□□□□□ -0.39
CASC4-201ENST00000299957 INIPQ9NRY2 104 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 TMEM184CQ9NVA4 438 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 GNG8Q9UK08 70 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 HSPE1-MOB4S4R3N1 261 aa12.61□□□□□ -0.39
CASC4-201ENST00000299957 NUPL2O15504 423 aaKnown RBP12.6□□□□□ -0.39
CASC4-201ENST00000299957 CD3GP09693 182 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 PEPDP12955 493 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms