RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 ZNF563Q8TA94 476 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 LRRC46Q96FV0 321 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF341Q9BYN7 854 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 TMEM59LQ9UK28 342 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 SLC22A14Q9Y267 594 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 PLXNA4Q9HCM2 1894 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 FGF19O95750 216 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 OLFM2O95897 454 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 GAAP10253 952 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 NELFEP18615 380 aaKnown RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 NDUFS1P28331 727 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 HOXA1P49639 335 aaPredicted RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 OAZ1P54368 228 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 TBX4P57082 545 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 BATFQ16520 125 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 NXPE1Q8N323 547 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 CADM2Q8N3J6 435 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 FAM216AQ8WUB2 273 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 RAB8BQ92930 207 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 MUL1Q969V5 352 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 TMBIM1Q969X1 311 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 SLC12A9Q9BXP2 914 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ADAM7Q9H2U9 754 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ADAMTS13Q76LX8 1427 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 HYKKA2RU49 373 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 F5H6K3 240 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 FHP07954 510 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 CD3GP09693 182 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 MYBP10242 640 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ADORA1P30542 326 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 CA5AP35218 305 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 GP2P55259 537 aaKnown RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 CHRNEQ04844 493 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF74Q16587 644 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 TMEM119Q4V9L6 283 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 GDPD4Q6W3E5 623 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 Q6ZNX1 250 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 C11orf96Q7Z7L8 435 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 LDB1Q86U70 411 aaPredicted RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 APCDD1Q8J025 514 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 TFGQ92734 400 aaPredicted RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 COPS8Q99627 209 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 RXFP3Q9NSD7 469 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 SACM1LQ9NTJ5 587 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 TCAF1Q9Y4C2 921 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 MAP4K5Q9Y4K4 846 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 TRAV20A0A0B4J274 112 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 B4GALT5O43286 388 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 GPRIN2O60269 458 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 RHOP08100 348 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 HOXA13P31271 388 aaPredicted RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 TSTQ16762 297 aaKnown RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ARHGAP40Q5TG30 622 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 CXorf40AQ8TE69 158 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 MACROD1Q9BQ69 325 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 DOHHQ9BU89 302 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 CIPCQ9C0C6 399 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 PIDD1Q9HB75 910 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 GSKIPQ9P0R6 139 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 TSPAN16Q9UKR8 245 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 STRAPQ9Y3F4 350 aaKnown RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 SLC22A23A1A5C7 686 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 KDELR3O43731 214 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 BNIP3LO60238 219 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 CLEC3BP05452 202 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 MTNR1AP48039 350 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 FOXO1Q12778 655 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 FAM214AQ32MH5 1076 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 Q3C1V9 767 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 FAM58AQ8N1B3 248 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 TAS1R2Q8TE23 839 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 SLC38A3Q99624 504 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 TMEM210A6NLX4 147 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 GPR182O15218 404 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ABLIM3O94929 683 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 MMP15P51511 669 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 CMASQ8NFW8 434 aaPredicted RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 OR9I1Q8NGQ6 314 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 CPNE4Q96A23 557 aaPredicted RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 CMSS1Q9BQ75 279 aaKnown RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 VAMP8Q9BV40 100 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ZDHHC11Q9H8X9 412 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 MED17Q9NVC6 651 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 SOHLH2Q9NX45 425 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 AGPSO00116 658 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 EEF1E1O43324 174 aaKnown RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 UPP2O95045 317 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 RAF1P04049 648 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 STAG3L1P0CL83 205 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 FOXN2P32314 431 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 CTHP32929 405 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 OPRL1P41146 370 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 BMXP51813 675 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 HSD17B7P56937 341 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 PLAG1Q6DJT9 500 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ALG1LQ6GMV1 187 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF783Q6ZMS7 281 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ERASQ7Z444 233 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 AQP11Q8NBQ7 271 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 C7orf43Q8WVR3 580 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms