RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 FNDC11Q9BVV2 318 aa18.12■□□□□ 0.49
TRA2A-201ENST00000297071 TMEM121BQ9BXQ6 578 aaPredicted RBP18.12■□□□□ 0.49
TRA2A-201ENST00000297071 PRM3Q9NNZ6 103 aa18.12■□□□□ 0.49
TRA2A-201ENST00000297071 SIRT3Q9NTG7 399 aaPredicted RBP18.12■□□□□ 0.49
TRA2A-201ENST00000297071 CBLCQ9ULV8 474 aa18.12■□□□□ 0.49
TRA2A-201ENST00000297071 A0A0X1KG70 313 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 ANKDD1BA6NHY2 528 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 GBAP04062 536 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 LIMS3P0CW19 117 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 LIMS4P0CW20 117 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 PSKH1P11801 424 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 MTNR1AP48039 350 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 MANFP55145 182 aaKnown RBP18.11■□□□□ 0.49
TRA2A-201ENST00000297071 BDH1Q02338 343 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 ADAM15Q13444 863 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 CST9Q5W186 159 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 LAMTOR1Q6IAA8 161 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 TMEM220Q6QAJ8 160 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 TMIGD1Q6UXZ0 262 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 FAM129CQ86XR2 697 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 CHST14Q8NCH0 376 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 OR4K5Q8NGD3 323 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 OR52N1Q8NH53 320 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 CAMK1GQ96NX5 476 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 SLC38A2Q96QD8 506 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 PITHD1Q9GZP4 211 aaPredicted RBP18.11■□□□□ 0.49
TRA2A-201ENST00000297071 MVB12BQ9H7P6 319 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 ATP13A2Q9NQ11 1180 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 MAN2C1Q9NTJ4 1040 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 MED17Q9NVC6 651 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 ADAM29Q9UKF5 820 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 SH2B3Q9UQQ2 575 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 RNF215Q9Y6U7 377 aa18.11■□□□□ 0.49
TRA2A-201ENST00000297071 TET1Q8NFU7 2136 aa18.1■□□□□ 0.49
TRA2A-201ENST00000297071 TEX51A0A1B0GUA7 166 aa18.1■□□□□ 0.49
TRA2A-201ENST00000297071 C17orf113A0A1B0GUU1 675 aa18.1■□□□□ 0.49
TRA2A-201ENST00000297071 ANHXE9PGG2 379 aa18.1■□□□□ 0.49
TRA2A-201ENST00000297071 CASKO14936 926 aa18.1■□□□□ 0.49
TRA2A-201ENST00000297071 CASC3O15234 703 aaKnown RBP18.1■□□□□ 0.49
TRA2A-201ENST00000297071 EPHX1P07099 455 aa18.1■□□□□ 0.49
TRA2A-201ENST00000297071 SNAPC1Q16533 368 aa18.1■□□□□ 0.49
TRA2A-201ENST00000297071 BTBD16Q32M84 506 aa18.1■□□□□ 0.49
TRA2A-201ENST00000297071 CEP78Q5JTW2 689 aa18.1■□□□□ 0.49
TRA2A-201ENST00000297071 OR2A12Q8NGT7 310 aa18.1■□□□□ 0.49
TRA2A-201ENST00000297071 RFKQ969G6 155 aa18.1■□□□□ 0.49
TRA2A-201ENST00000297071 TM4SF18Q96CE8 201 aa18.1■□□□□ 0.49
TRA2A-201ENST00000297071 LRIG1Q96JA1 1093 aa18.1■□□□□ 0.49
TRA2A-201ENST00000297071 ANKRD19PQ9H560 264 aa18.1■□□□□ 0.49
TRA2A-201ENST00000297071 PELI2Q9HAT8 420 aa18.1■□□□□ 0.49
TRA2A-201ENST00000297071 SLAMF7Q9NQ25 335 aa18.1■□□□□ 0.49
TRA2A-201ENST00000297071 KLF15Q9UIH9 416 aa18.1■□□□□ 0.49
TRA2A-201ENST00000297071 EXOGQ9Y2C4 368 aaKnown RBP18.1■□□□□ 0.49
TRA2A-201ENST00000297071 AUP1Q9Y679 476 aa18.1■□□□□ 0.49
TRA2A-201ENST00000297071 LRRK1Q38SD2 2015 aa18.1■□□□□ 0.49
TRA2A-201ENST00000297071 LINC00862A6NCI5 91 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 AKAP8O43823 692 aaKnown RBP18.09■□□□□ 0.49
TRA2A-201ENST00000297071 TIMP2P16035 220 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 ETV3P41162 512 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 RECQLP46063 649 aaPredicted RBP18.09■□□□□ 0.49
TRA2A-201ENST00000297071 VASPP50552 380 aaPredicted RBP18.09■□□□□ 0.49
TRA2A-201ENST00000297071 TRA2BP62995 288 aaKnown RBP18.09■□□□□ 0.49
TRA2A-201ENST00000297071 MRPL28Q13084 256 aaKnown RBP18.09■□□□□ 0.49
TRA2A-201ENST00000297071 GNA13Q14344 377 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 HSD17B12Q53GQ0 312 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 SLC27A4Q6P1M0 643 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 TNFAIP8L2Q6P589 184 aaPredicted RBP18.09■□□□□ 0.49
TRA2A-201ENST00000297071 BCDIN3DQ7Z5W3 292 aaKnown RBP18.09■□□□□ 0.49
TRA2A-201ENST00000297071 UPRTQ96BW1 309 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 KCTD12Q96CX2 325 aaKnown RBP18.09■□□□□ 0.49
TRA2A-201ENST00000297071 LINC00615Q96LM1 132 aaPredicted RBP18.09■□□□□ 0.49
TRA2A-201ENST00000297071 GPR137Q96N19 417 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 ZCCHC2Q9C0B9 1178 aaKnown RBP18.09■□□□□ 0.49
TRA2A-201ENST00000297071 BTBD1Q9H0C5 482 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 C11orf49Q9H6J7 331 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 STARD7Q9NQZ5 370 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 COMMD3Q9UBI1 195 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 ITM2BQ9Y287 266 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.09■□□□□ 0.49
TRA2A-201ENST00000297071 CARNS1A5YM72 827 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 INMT-MINDY4F8WBC2 141 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 HPGDSO60760 199 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 NOS1APO75052 506 aaPredicted RBP18.09■□□□□ 0.49
TRA2A-201ENST00000297071 UBXN7O94888 489 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 HOXD10P28358 340 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 PDHA2P29803 388 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 PPP2R1BP30154 601 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 ANXA11P50995 505 aaKnown RBP18.09■□□□□ 0.49
TRA2A-201ENST00000297071 DGKEP52429 567 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 ATP12AP54707 1039 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 PAMR1Q6UXH9 720 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 RASSF6Q6ZTQ3 369 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 RFPL4BQ6ZWI9 263 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 UTS2BQ765I0 119 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 ELMOD2Q8IZ81 293 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 LILRA3Q8N6C8 439 aaPredicted RBP18.09■□□□□ 0.49
TRA2A-201ENST00000297071 IQCF1Q8N6M8 205 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 ANKK1Q8NFD2 765 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 TEX47Q8TBZ9 253 aa18.09■□□□□ 0.49
TRA2A-201ENST00000297071 SMG7Q92540 1137 aaKnown RBP18.09■□□□□ 0.49
TRA2A-201ENST00000297071 FOXJ1Q92949 421 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms