RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 GRHL2Q6ISB3 625 aa8.48□□□□□ -1.05
CNOT9-202ENST00000295701 SYDE1Q6ZW31 735 aaPredicted RBP8.48□□□□□ -1.05
CNOT9-202ENST00000295701 YRDCQ86U90 279 aaKnown RBP8.48□□□□□ -1.05
CNOT9-202ENST00000295701 WFDC8Q8IUA0 241 aa8.48□□□□□ -1.05
CNOT9-202ENST00000295701 KRTAP1-3Q8IUG1 177 aa8.48□□□□□ -1.05
CNOT9-202ENST00000295701 C9orf106Q8NAJ2 232 aa8.48□□□□□ -1.05
CNOT9-202ENST00000295701 SPPL2AQ8TCT8 520 aa8.48□□□□□ -1.05
CNOT9-202ENST00000295701 PYROXD1Q8WU10 500 aa8.48□□□□□ -1.05
CNOT9-202ENST00000295701 RIT1Q92963 219 aa8.48□□□□□ -1.05
CNOT9-202ENST00000295701 NXNL1Q96CM4 212 aa8.48□□□□□ -1.05
CNOT9-202ENST00000295701 MBD6Q96DN6 1003 aa8.48□□□□□ -1.05
CNOT9-202ENST00000295701 TSPAN17Q96FV3 270 aa8.48□□□□□ -1.05
CNOT9-202ENST00000295701 ART5Q96L15 291 aa8.48□□□□□ -1.05
CNOT9-202ENST00000295701 ZNF597Q96LX8 424 aa8.48□□□□□ -1.05
CNOT9-202ENST00000295701 RILPQ96NA2 401 aa8.48□□□□□ -1.05
CNOT9-202ENST00000295701 TRIB1Q96RU8 372 aa8.48□□□□□ -1.05
CNOT9-202ENST00000295701 UGT2B28Q9BY64 529 aa8.48□□□□□ -1.05
CNOT9-202ENST00000295701 UBQLN3Q9H347 655 aa8.48□□□□□ -1.05
CNOT9-202ENST00000295701 NSMCE4AQ9NXX6 385 aa8.48□□□□□ -1.05
CNOT9-202ENST00000295701 OPTCQ9UBM4 332 aa8.48□□□□□ -1.05
CNOT9-202ENST00000295701 PCDHGB3Q9Y5G1 929 aa8.48□□□□□ -1.05
CNOT9-202ENST00000295701 NPFFR2Q9Y5X5 522 aa8.48□□□□□ -1.05
CNOT9-202ENST00000295701 PRR14LQ5THK1 2151 aa8.48□□□□□ -1.05
CNOT9-202ENST00000295701 DSCAMO60469 2012 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 A0A0A6YYD5 115 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 C2orf92A0A1B0GVN3 265 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 TCRBV9S1A1TA0A576 114 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 TUBAL3A6NHL2 446 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 FAM159BA6NKW6 160 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 EEF1E1-BLOC1S5C9J1V9 151 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 EEF1E1O43324 174 aaKnown RBP8.47□□□□□ -1.05
CNOT9-202ENST00000295701 AIFM1O95831 613 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 RAF1P04049 648 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 HPNP05981 417 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 FAM58BPP0C7Q3 252 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 SLC35E2BP0CK96 405 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 MTHFD2P13995 350 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 DRD2P14416 443 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 TCP1P17987 556 aaKnown RBP8.47□□□□□ -1.05
CNOT9-202ENST00000295701 HOXC12P31275 282 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 TLX1P31314 330 aaPredicted RBP8.47□□□□□ -1.05
CNOT9-202ENST00000295701 GP5P40197 560 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 CASP3P42574 277 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 NEK2P51955 445 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 NAGLUP54802 743 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 IRF9Q00978 393 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 PCDH1Q08174 1060 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 KEAP1Q14145 624 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 NNATQ16517 81 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 NSUN5P2Q63ZY6 315 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 C3orf62Q6ZUJ4 267 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 MAATS1Q7Z4T9 603 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 MYLK4Q86YV6 388 aaPredicted RBP8.47□□□□□ -1.05
CNOT9-202ENST00000295701 LACC1Q8IV20 430 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 ZCCHC7Q8N3Z6 543 aaKnown RBP8.47□□□□□ -1.05
CNOT9-202ENST00000295701 ZNF615Q8N8J6 731 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 SIMC1Q8NDZ2 872 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 STAG3L4Q8TBR4 150 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 SLC44A1Q8WWI5 657 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 UBE2E3Q969T4 207 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 ADIPOR1Q96A54 375 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 CPNE1Q99829 537 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 ANGPTL4Q9BY76 406 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 PRDM14Q9GZV8 571 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 DPH5Q9H2P9 285 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 TEX10Q9NXF1 929 aaPredicted RBP8.47□□□□□ -1.05
CNOT9-202ENST00000295701 MS4A12Q9NXJ0 267 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 NUDT4Q9NZJ9 180 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 ZNF629Q9UEG4 869 aaPredicted RBP8.47□□□□□ -1.05
CNOT9-202ENST00000295701 MTRF1LQ9UGC7 380 aaKnown RBP8.47□□□□□ -1.05
CNOT9-202ENST00000295701 PHF11Q9UIL8 331 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 DTX4Q9Y2E6 619 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 RNF11Q9Y3C5 154 aa8.47□□□□□ -1.05
CNOT9-202ENST00000295701 ROS1P08922 2347 aa8.46□□□□□ -1.05
CNOT9-202ENST00000295701 A0A1B0GTL3 188 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 ANKRD33BA6NCL7 494 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 MBD3L4A6NDZ8 208 aaPredicted RBP8.46□□□□□ -1.06
CNOT9-202ENST00000295701 MBD3L3A6NE82 208 aaPredicted RBP8.46□□□□□ -1.06
CNOT9-202ENST00000295701 MBD3L5A6NJ08 208 aaPredicted RBP8.46□□□□□ -1.06
CNOT9-202ENST00000295701 OR6C76A6NM76 312 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 CLCA1A8K7I4 914 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 TP53I11O14683 189 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 HRGP04196 525 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 ABCB1P08183 1280 aaPredicted RBP8.46□□□□□ -1.06
CNOT9-202ENST00000295701 H2AFB1P0C5Y9 115 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 H2AFB2P0C5Z0 115 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 NR2F6P10588 404 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 FOSL1P15407 271 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 CD53P19397 219 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 S1PR1P21453 382 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 CTSSP25774 331 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 PTGDSP41222 190 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 BUD31P41223 144 aaPredicted RBP8.46□□□□□ -1.06
CNOT9-202ENST00000295701 TBL3Q12788 808 aaKnown RBP8.46□□□□□ -1.06
CNOT9-202ENST00000295701 BIKQ13323 160 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 RPS6KA2Q15349 733 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 CPSF6Q16630 551 aaKnown RBP eCLIP8.46□□□□□ -1.06
CNOT9-202ENST00000295701 FAM111BQ6SJ93 734 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 RAPH1Q70E73 1250 aa8.46□□□□□ -1.06
CNOT9-202ENST00000295701 CAMKMTQ7Z624 323 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms