RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 POP7O75817 140 aaKnown RBP12.7□□□□□ -0.38
SCAF4-201ENST00000286835 HSD3B1P14060 373 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 TYRP14679 529 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 HSD3B2P26439 372 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 KIR2DL3P43628 341 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 SEC13P55735 322 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 GPLD1P80108 840 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 SEC23BQ15437 767 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 OR4N4Q8N0Y3 316 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 RASGEF1AQ8N9B8 481 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 CXorf40AQ8TE69 158 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 BCL7CQ8WUZ0 217 aaPredicted RBP12.7□□□□□ -0.38
SCAF4-201ENST00000286835 GLYATL1Q969I3 302 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 TRMT61AQ96FX7 289 aaKnown RBP12.7□□□□□ -0.38
SCAF4-201ENST00000286835 P2RX2Q9UBL9 471 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 MYO16Q9Y6X6 1858 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 KCNE1BA0A087WTH5 132 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 PGRMC2O15173 223 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 SLC16A5O15375 505 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 PRG2P13727 222 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 PCSK2P16519 638 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 HLA-FP30511 346 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 FGFBP1Q14512 234 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 SUZ12Q15022 739 aaKnown RBP12.69□□□□□ -0.38
SCAF4-201ENST00000286835 WDR45BQ5MNZ6 344 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 ARTNQ5T4W7 220 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 MEDAGQ5VYS4 303 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 SAXO2Q658L1 398 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 ANKRD54Q6NXT1 300 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 BHLHB9Q6PI77 547 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 SIMC1Q8NDZ2 872 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 BEST4Q8NFU0 473 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 SLC7A13Q8TCU3 470 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 RAD51AP1Q96B01 352 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 PPP1R16AQ96I34 528 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 C17orf62Q9BQA9 187 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 AIF1LQ9BQI0 150 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 OR51I1Q9H343 314 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 DMRT3Q9NQL9 472 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 ZAR1LA6NP61 321 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 MRPL3P09001 348 aaKnown RBP12.69□□□□□ -0.38
SCAF4-201ENST00000286835 HBQ1P09105 142 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 FURINP09958 794 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 ARAFP10398 606 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 VIPR1P32241 457 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 GPR4P46093 362 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 RFX2P48378 723 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 ZNF81P51508 661 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 LIM2P55344 173 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 PPP3R1P63098 170 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 DBPQ10586 325 aaPredicted RBP12.69□□□□□ -0.38
SCAF4-201ENST00000286835 RPA4Q13156 261 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 P2RY14Q15391 338 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 SLC27A4Q6P1M0 643 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 WDR20Q8TBZ3 569 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 OR8D1Q8WZ84 308 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 FAM46AQ96IP4 442 aaKnown RBP12.69□□□□□ -0.38
SCAF4-201ENST00000286835 ZNF334Q9HCZ1 680 aaPredicted RBP12.69□□□□□ -0.38
SCAF4-201ENST00000286835 IMP3Q9NV31 184 aaKnown RBP12.69□□□□□ -0.38
SCAF4-201ENST00000286835 BACE2Q9Y5Z0 518 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 CSNK1G3Q9Y6M4 447 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 HYKKA2RU49 373 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 VNN2O95498 520 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 HLA-DPB1P04440 258 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 ALAS2P22557 587 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 GIPRP48546 466 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 ADAM15Q13444 863 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 CDKL4Q5MAI5 379 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 FAM205BPQ63HN1 556 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 WDR53Q7Z5U6 358 aaPredicted RBP12.69□□□□□ -0.38
SCAF4-201ENST00000286835 CCDC116Q8IYX3 515 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 SLC39A11Q8N1S5 342 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 OR9A1PQ8NGU1 263 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 AKAP1Q92667 903 aaKnown RBP eCLIP12.69□□□□□ -0.38
SCAF4-201ENST00000286835 ZSCAN5AQ9BUG6 496 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 DPCDQ9BVM2 203 aaPredicted RBP12.69□□□□□ -0.38
SCAF4-201ENST00000286835 RHBGQ9H310 441 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 CWH43Q9H720 699 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 MVB12BQ9H7P6 319 aa12.69□□□□□ -0.38
SCAF4-201ENST00000286835 SPATA6Q9NWH7 488 aaPredicted RBP12.69□□□□□ -0.38
SCAF4-201ENST00000286835 TNS1Q9HBL0 1735 aaKnown RBP12.69□□□□□ -0.38
SCAF4-201ENST00000286835 TRBV5-4A0A0C4DH59 114 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 C1QTNF3-AMACRE9PGA6 284 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 H0YIV9 168 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 PI15O43692 258 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 ELAVL4P26378 380 aaKnown RBP12.68□□□□□ -0.38
SCAF4-201ENST00000286835 MLLT11Q13015 90 aaPredicted RBP12.68□□□□□ -0.38
SCAF4-201ENST00000286835 GRIN2CQ14957 1233 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 BRAT1Q6PJG6 821 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 GDPGP1Q6ZNW5 385 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 LSRQ86X29 649 aaPredicted RBP12.68□□□□□ -0.38
SCAF4-201ENST00000286835 CHTF18Q8WVB6 975 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 ECHDC3Q96DC8 303 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 TOX2Q96NM4 488 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 SPATA5L1Q9BVQ7 753 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 BRF2Q9HAW0 419 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 C1GALT1Q9NS00 363 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 MRPL15Q9P015 296 aaKnown RBP12.68□□□□□ -0.38
SCAF4-201ENST00000286835 POLR1CO15160 346 aaPredicted RBP12.68□□□□□ -0.38
SCAF4-201ENST00000286835 AKAP8O43823 692 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms