RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 GAL3ST4Q96RP7 486 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 DTX4Q9Y2E6 619 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 CBX7O95931 251 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 T-ENOLP0DO92 83 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 IDO1P14902 403 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 S1PR1P21453 382 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 MPIP34949 423 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 DGKQP52824 942 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 RPS6KA2Q15349 733 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 TCTN3Q6NUS6 607 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 HSDL2Q6YN16 418 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 RNF111Q6ZNA4 994 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 ZNF764Q96H86 408 aaPredicted RBP17.03■□□□□ 0.32
SDF4-201ENST00000263741 CCDC28BQ9BUN5 200 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 CDCP1Q9H5V8 836 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 ANKRD10Q9NXR5 420 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 PLA2G3Q9NZ20 509 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 BCAP29Q9UHQ4 241 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 PCDHGA9Q9Y5G4 932 aaKnown RBP17.03■□□□□ 0.32
SDF4-201ENST00000263741 TBX19O60806 448 aa17.02■□□□□ 0.32
SDF4-201ENST00000263741 GALNSP34059 522 aa17.02■□□□□ 0.32
SDF4-201ENST00000263741 SOX11P35716 441 aa17.02■□□□□ 0.32
SDF4-201ENST00000263741 SLC37A1P57057 533 aa17.02■□□□□ 0.32
SDF4-201ENST00000263741 RNF4P78317 190 aa17.02■□□□□ 0.32
SDF4-201ENST00000263741 NNATQ16517 81 aa17.02■□□□□ 0.32
SDF4-201ENST00000263741 FAM174BQ3ZCQ3 159 aa17.02■□□□□ 0.32
SDF4-201ENST00000263741 ANKRD46Q86W74 232 aa17.02■□□□□ 0.32
SDF4-201ENST00000263741 SAMD14Q8IZD0 417 aaPredicted RBP17.02■□□□□ 0.32
SDF4-201ENST00000263741 CLECL1Q8IZS7 167 aa17.02■□□□□ 0.32
SDF4-201ENST00000263741 BEST3Q8N1M1 668 aa17.02■□□□□ 0.32
SDF4-201ENST00000263741 ARHGAP24Q8N264 748 aa17.02■□□□□ 0.32
SDF4-201ENST00000263741 DUSP26Q9BV47 211 aa17.02■□□□□ 0.32
SDF4-201ENST00000263741 CLMPQ9H6B4 373 aa17.02■□□□□ 0.32
SDF4-201ENST00000263741 TMEM200CA6NKL6 621 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 WWP2O00308 870 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 CD1EP15812 388 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 RPL3P39023 403 aaKnown RBP17.01■□□□□ 0.31
SDF4-201ENST00000263741 C21orf58P58505 322 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 PHC1P78364 1004 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 FUT7Q11130 342 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 MAP4K2Q12851 820 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 KRT72Q14CN4 511 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 TAF11Q15544 211 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 CRB2Q5IJ48 1285 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 JMJD6Q6NYC1 403 aaPredicted RBP17.01■□□□□ 0.31
SDF4-201ENST00000263741 PAOXQ6QHF9 649 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 ZNF615Q8N8J6 731 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 OR52R1Q8NGF1 315 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 ZNF675Q8TD23 568 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 CTHRC1Q96CG8 243 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 COQ8BQ96D53 544 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 ART5Q96L15 291 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 SMAD5Q99717 465 aaKnown RBP17.01■□□□□ 0.31
SDF4-201ENST00000263741 OR10A5Q9H207 317 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 COPG1Q9Y678 874 aaKnown RBP17.01■□□□□ 0.31
SDF4-201ENST00000263741 PRRC2CQ9Y520 2896 aaKnown RBP17.01■□□□□ 0.31
SDF4-201ENST00000263741 C6orf47O95873 294 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 ABCB1P08183 1280 aaPredicted RBP17.01■□□□□ 0.31
SDF4-201ENST00000263741 GPC1P35052 558 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 FRKP42685 505 aaPredicted RBP17.01■□□□□ 0.31
SDF4-201ENST00000263741 MANFP55145 182 aaKnown RBP17.01■□□□□ 0.31
SDF4-201ENST00000263741 PDCD4Q53EL6 469 aaKnown RBP17.01■□□□□ 0.31
SDF4-201ENST00000263741 ACER2Q5QJU3 275 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 H3F3CQ6NXT2 135 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 ISLR2Q6UXK2 745 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 SZRD1Q7Z422 152 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 SLC5A8Q8N695 610 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 C16orf52Q8NHV5 167 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 ZBED6CLQ96FA7 236 aaPredicted RBP17.01■□□□□ 0.31
SDF4-201ENST00000263741 NSL1Q96IY1 281 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 ZNF570Q96NI8 536 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 SDR39U1Q9NRG7 319 aaPredicted RBP17.01■□□□□ 0.31
SDF4-201ENST00000263741 ZNF639Q9UID6 485 aa17.01■□□□□ 0.31
SDF4-201ENST00000263741 ZFAND5O76080 213 aa17■□□□□ 0.31
SDF4-201ENST00000263741 ALPPP05187 535 aa17■□□□□ 0.31
SDF4-201ENST00000263741 NCF2P19878 526 aaPredicted RBP17■□□□□ 0.31
SDF4-201ENST00000263741 WNT3P56703 355 aa17■□□□□ 0.31
SDF4-201ENST00000263741 EBPQ15125 230 aaKnown RBP17■□□□□ 0.31
SDF4-201ENST00000263741 GSTA3Q16772 222 aa17■□□□□ 0.31
SDF4-201ENST00000263741 FHL5Q5TD97 284 aa17■□□□□ 0.31
SDF4-201ENST00000263741 ABHD17BQ5VST6 288 aa17■□□□□ 0.31
SDF4-201ENST00000263741 ASB18Q6ZVZ8 466 aa17■□□□□ 0.31
SDF4-201ENST00000263741 RPS19BP1Q86WX3 136 aaKnown RBP17■□□□□ 0.31
SDF4-201ENST00000263741 C7orf57Q8NEG2 295 aa17■□□□□ 0.31
SDF4-201ENST00000263741 MCUR1Q96AQ8 359 aa17■□□□□ 0.31
SDF4-201ENST00000263741 UBL7Q96S82 380 aaPredicted RBP17■□□□□ 0.31
SDF4-201ENST00000263741 PRPF18Q99633 342 aaKnown RBP17■□□□□ 0.31
SDF4-201ENST00000263741 BTBD10Q9BSF8 475 aa17■□□□□ 0.31
SDF4-201ENST00000263741 ADNPQ9H2P0 1102 aa17■□□□□ 0.31
SDF4-201ENST00000263741 DCLRE1BQ9H816 532 aa17■□□□□ 0.31
SDF4-201ENST00000263741 ATAD3AQ9NVI7 634 aa17■□□□□ 0.31
SDF4-201ENST00000263741 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17■□□□□ 0.312e-9■■■■■ 35.8
SDF4-201ENST00000263741 A0A1W2PRB8 838 aa17■□□□□ 0.31
SDF4-201ENST00000263741 ZNF354AO60765 605 aaPredicted RBP17■□□□□ 0.31
SDF4-201ENST00000263741 KIR3DL1P43629 444 aa17■□□□□ 0.31
SDF4-201ENST00000263741 ZFP36L2P47974 494 aaKnown RBP17■□□□□ 0.31
SDF4-201ENST00000263741 AP2B1P63010 937 aa17■□□□□ 0.31
SDF4-201ENST00000263741 ZNF468Q5VIY5 522 aaPredicted RBP17■□□□□ 0.31
SDF4-201ENST00000263741 WDR53Q7Z5U6 358 aaPredicted RBP17■□□□□ 0.31
SDF4-201ENST00000263741 CAMKMTQ7Z624 323 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms