RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 C6orf132Q5T0Z8 1188 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 PARP8Q8N3A8 854 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 OR10G2Q8NGC3 310 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 GPBAR1Q8TDU6 330 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 HTRA1Q92743 480 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 TREX2Q9BQ50 279 aaPredicted RBP12.79□□□□□ -0.36
VMP1-201ENST00000262291 ZNF229Q9UJW7 825 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 B3GNT3Q9Y2A9 372 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 PCDHGB3Q9Y5G1 929 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 OR2A25A4D2G3 310 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 H0YGG7 62 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 M0R3H8 397 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 STK25O00506 426 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 JUNDP17535 347 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 ARF3P61204 181 aaPredicted RBP12.78□□□□□ -0.36
VMP1-201ENST00000262291 RPS15AP62244 130 aaKnown RBP12.78□□□□□ -0.36
VMP1-201ENST00000262291 RPP38P78345 283 aaKnown RBP12.78□□□□□ -0.36
VMP1-201ENST00000262291 RGS1Q08116 209 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 UBE2UQ5VVX9 321 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 KLHDC7BQ96G42 594 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 RDH12Q96NR8 316 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 GABARAPL1Q9H0R8 117 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 IL21RQ9HBE5 538 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 ACSS1Q9NUB1 689 aaPredicted RBP12.78□□□□□ -0.36
VMP1-201ENST00000262291 CES1P1Q9UKY3 287 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 IFT52Q9Y366 437 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 SLC1A7O00341 560 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 FFAR1O14842 300 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 SEMA7AO75326 666 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 WNT1P04628 370 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 ENDOUP21128 410 aaKnown RBP12.78□□□□□ -0.36
VMP1-201ENST00000262291 SLC13A2Q13183 592 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 KIR2DS3Q14952 304 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 ATAD3BQ5T9A4 648 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 AGAP7PQ5VUJ5 663 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 SLC48A1Q6P1K1 146 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 LILRB4Q8NHJ6 448 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 GEMIN6Q8WXD5 167 aaKnown RBP12.78□□□□□ -0.36
VMP1-201ENST00000262291 ZNF347Q96SE7 839 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 PSD2Q9BQI7 771 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 DGCR6LQ9BY27 220 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 GSDMCQ9BYG8 508 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 RBCK1Q9BYM8 510 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 AMBNQ9NP70 447 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 SLC6A14Q9UN76 642 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 CARD8Q9Y2G2 431 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 LRP4O75096 1905 aa12.78□□□□□ -0.36
VMP1-201ENST00000262291 VPS13AQ96RL7 3174 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 IGHV1OR15-9A0A0B4J2B8 117 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 FAM170BA6NMN3 283 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 TBX19O60806 448 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 SDC3O75056 442 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 MFN2O95140 757 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 CHRM4P08173 479 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 SLC35G6P0C7Q6 338 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 NR2F6P10588 404 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 CPN2P22792 545 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 VSX2P58304 361 aaPredicted RBP12.77□□□□□ -0.36
VMP1-201ENST00000262291 TRA2BP62995 288 aaKnown RBP12.77□□□□□ -0.36
VMP1-201ENST00000262291 NPRL3Q12980 569 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 AQP6Q13520 282 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 GPAT3Q53EU6 434 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 TMEM236Q5W0B7 351 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 B3GNT8Q7Z7M8 397 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 SLC22A16Q86VW1 577 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 MEX3DQ86XN8 651 aaKnown RBP12.77□□□□□ -0.36
VMP1-201ENST00000262291 ARMC8Q8IUR7 673 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 IQCF2Q8IXL9 164 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 KLHL6Q8WZ60 621 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 ZG16BQ96DA0 208 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 RNF31Q96EP0 1072 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 EPYCQ99645 322 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 ORAI3Q9BRQ5 295 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 LHPPQ9H008 270 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 FAM60AQ9NP50 221 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 A4GALTQ9NPC4 353 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 ACER3Q9NUN7 267 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 WDR70Q9NW82 654 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 ERVK-18Q9QC07 812 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 SEC14L3Q9UDX4 400 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 PRELID1Q9Y255 219 aa12.77□□□□□ -0.36
VMP1-201ENST00000262291 WBP11Q9Y2W2 641 aaKnown RBP12.77□□□□□ -0.36
VMP1-201ENST00000262291 A0A1W2PPC4 97 aa12.77□□□□□ -0.37
VMP1-201ENST00000262291 TRIM64A6NGJ6 449 aa12.77□□□□□ -0.37
VMP1-201ENST00000262291 SLC16A6O15403 523 aa12.77□□□□□ -0.37
VMP1-201ENST00000262291 FRS3O43559 492 aa12.77□□□□□ -0.37
VMP1-201ENST00000262291 LDB3O75112 727 aa12.77□□□□□ -0.37
VMP1-201ENST00000262291 NTN1O95631 604 aa12.77□□□□□ -0.37
VMP1-201ENST00000262291 ANGPTL1O95841 491 aa12.77□□□□□ -0.37
VMP1-201ENST00000262291 IFNW1P05000 195 aa12.77□□□□□ -0.37
VMP1-201ENST00000262291 CSNK2A2P19784 350 aaPredicted RBP12.77□□□□□ -0.37
VMP1-201ENST00000262291 HHEXQ03014 270 aa12.77□□□□□ -0.37
VMP1-201ENST00000262291 FUT5Q11128 374 aa12.77□□□□□ -0.37
VMP1-201ENST00000262291 EPS8Q12929 822 aa12.77□□□□□ -0.37
VMP1-201ENST00000262291 NDUFA5Q16718 116 aa12.77□□□□□ -0.37
VMP1-201ENST00000262291 FAHD1Q6P587 224 aa12.77□□□□□ -0.37
VMP1-201ENST00000262291 ZNF773Q6PK81 442 aa12.77□□□□□ -0.37
VMP1-201ENST00000262291 RFPL4BQ6ZWI9 263 aa12.77□□□□□ -0.37
VMP1-201ENST00000262291 SYT13Q7L8C5 426 aa12.77□□□□□ -0.37
VMP1-201ENST00000262291 ANKRD13BQ86YJ7 626 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms