RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 OSMP13725 252 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 OR3A3P47888 321 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 DGKGP49619 791 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 HNMTP50135 292 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 MAPK12P53778 367 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 SNRPD1P62314 119 aaKnown RBP12.28□□□□□ -0.44
SNX1-201ENST00000261889 ZNF267Q14586 743 aaPredicted RBP12.28□□□□□ -0.44
SNX1-201ENST00000261889 LASP1Q14847 261 aaKnown RBP12.28□□□□□ -0.44
SNX1-201ENST00000261889 ZMYND11Q15326 602 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 FCN2Q15485 313 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 ANXA8L1Q5VT79 327 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 ZNF770Q6IQ21 691 aaPredicted RBP12.28□□□□□ -0.44
SNX1-201ENST00000261889 RPTNQ6XPR3 784 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 KRT73Q86Y46 540 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 SIMC1Q8NDZ2 872 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 C16orf58Q96GQ5 468 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 MND1Q9BWT6 205 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 NLNQ9BYT8 704 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 SERHL2Q9H4I8 314 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 XKR8Q9H6D3 395 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 ISG20L2Q9H9L3 353 aaKnown RBP12.28□□□□□ -0.44
SNX1-201ENST00000261889 TAC3Q9UHF0 121 aa12.28□□□□□ -0.44
SNX1-201ENST00000261889 ZFR2Q9UPR6 939 aaKnown RBP12.28□□□□□ -0.44
SNX1-201ENST00000261889 TP53BP1Q12888 1972 aaPredicted RBP12.28□□□□□ -0.44
SNX1-201ENST00000261889 GREM1O60565 184 aa12.27□□□□□ -0.44
SNX1-201ENST00000261889 UGT2B17O75795 530 aa12.27□□□□□ -0.44
SNX1-201ENST00000261889 CATP04040 527 aaKnown RBP12.27□□□□□ -0.44
SNX1-201ENST00000261889 NR2F1P10589 423 aa12.27□□□□□ -0.44
SNX1-201ENST00000261889 MYL12AP19105 171 aa12.27□□□□□ -0.44
SNX1-201ENST00000261889 TBXA2RP21731 343 aa12.27□□□□□ -0.44
SNX1-201ENST00000261889 DRD5P21918 477 aa12.27□□□□□ -0.44
SNX1-201ENST00000261889 POU6F2P78424 691 aaPredicted RBP12.27□□□□□ -0.44
SNX1-201ENST00000261889 TMEM115Q12893 351 aaPredicted RBP12.27□□□□□ -0.44
SNX1-201ENST00000261889 ZSWIM7Q19AV6 140 aa12.27□□□□□ -0.44
SNX1-201ENST00000261889 SFTPA1Q8IWL2 248 aa12.27□□□□□ -0.44
SNX1-201ENST00000261889 NANOGP1Q8N7R0 232 aa12.27□□□□□ -0.44
SNX1-201ENST00000261889 OR13C5Q8NGS8 318 aa12.27□□□□□ -0.44
SNX1-201ENST00000261889 SMG7Q92540 1137 aaKnown RBP12.27□□□□□ -0.44
SNX1-201ENST00000261889 AP2M1Q96CW1 435 aa12.27□□□□□ -0.44
SNX1-201ENST00000261889 KCTD7Q96MP8 289 aa12.27□□□□□ -0.44
SNX1-201ENST00000261889 ZFP3Q96NJ6 502 aa12.27□□□□□ -0.44
SNX1-201ENST00000261889 ACOXLQ9NUZ1 547 aa12.27□□□□□ -0.44
SNX1-201ENST00000261889 FBXW2Q9UKT8 454 aa12.27□□□□□ -0.44
SNX1-201ENST00000261889 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.27□□□□□ -0.45
SNX1-201ENST00000261889 WASH3PC4AMC7 463 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 SIGLEC5O15389 551 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 SIGLEC14Q08ET2 396 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 CLPPQ16740 277 aaPredicted RBP12.27□□□□□ -0.45
SNX1-201ENST00000261889 GGTA1PQ4G0N0 100 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 LIPJQ5W064 366 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 LAMTOR1Q6IAA8 161 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 REEP3Q6NUK4 255 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 LINC00299Q6ZSB3 139 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 C6orf120Q7Z4R8 191 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 NR2C2APQ86WQ0 139 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 OR8D4Q8NGM9 314 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 TCEAL4Q96EI5 215 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 C11orf24Q96F05 449 aaPredicted RBP12.27□□□□□ -0.45
SNX1-201ENST00000261889 ZNF582Q96NG8 517 aaPredicted RBP12.27□□□□□ -0.45
SNX1-201ENST00000261889 TREX2Q9BQ50 279 aaPredicted RBP12.27□□□□□ -0.45
SNX1-201ENST00000261889 ANKHQ9HCJ1 492 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 DMRT3Q9NQL9 472 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 SEC14L4Q9UDX3 406 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 ASF1AQ9Y294 204 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 GPR55Q9Y2T6 319 aaPredicted RBP12.27□□□□□ -0.45
SNX1-201ENST00000261889 COL4A4P53420 1690 aaPredicted RBP12.27□□□□□ -0.45
SNX1-201ENST00000261889 EEF1E1O43324 174 aaKnown RBP12.27□□□□□ -0.45
SNX1-201ENST00000261889 LZTS3O60299 673 aaPredicted RBP12.27□□□□□ -0.45
SNX1-201ENST00000261889 RHCEP18577 417 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 CPN2P22792 545 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 SLC6A11P48066 632 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 CSNK2BP67870 215 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 KRR1Q13601 381 aaKnown RBP12.27□□□□□ -0.45
SNX1-201ENST00000261889 PIP5KL1Q5T9C9 394 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 LCN1P1Q5VSP4 162 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 GRHL2Q6ISB3 625 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 HSDL2Q6YN16 418 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 DDX53Q86TM3 631 aaKnown RBP12.27□□□□□ -0.45
SNX1-201ENST00000261889 DNAJB8Q8NHS0 232 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 ZNF461Q8TAF7 563 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 QRFPRQ96P65 431 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 FCRL4Q96PJ5 515 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 FNDC11Q9BVV2 318 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 CHIAQ9BZP6 476 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 CWH43Q9H720 699 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 ZNF624Q9P2J8 865 aaPredicted RBP12.27□□□□□ -0.45
SNX1-201ENST00000261889 SPEF1Q9Y4P9 236 aa12.27□□□□□ -0.45
SNX1-201ENST00000261889 RNASET2O00584 256 aaKnown RBP12.26□□□□□ -0.45
SNX1-201ENST00000261889 SOCS6O14544 535 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 LYRM1O43325 122 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 PIP5K1CO60331 668 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 GPR37L1O60883 481 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 CD3GP09693 182 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 CXCL3P19876 107 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 PSMA3P25788 255 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 ETV6P41212 452 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 RPL6Q02878 288 aaKnown RBP12.26□□□□□ -0.45
SNX1-201ENST00000261889 EEF1A2Q05639 463 aaKnown RBP12.26□□□□□ -0.45
SNX1-201ENST00000261889 CAMK1Q14012 370 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 EIF4HQ15056 248 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms