RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 CDK10Q15131 360 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 LDLRAD1Q5T700 205 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 ACSM5Q6NUN0 579 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 TRIM46Q7Z4K8 759 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 TMED4Q7Z7H5 227 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 IL17RDQ8NFM7 739 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 SLC7A13Q8TCU3 470 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 CXorf40AQ8TE69 158 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 SPRYD4Q8WW59 207 aaPredicted RBP9.58□□□□□ -0.88
PALB2-201ENST00000261584 ZBED6CLQ96FA7 236 aaPredicted RBP9.58□□□□□ -0.88
PALB2-201ENST00000261584 ZNF559Q9BR84 538 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 TTLL2Q9BWV7 592 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 SPNS1Q9H2V7 528 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 ZNF334Q9HCZ1 680 aaPredicted RBP9.58□□□□□ -0.88
PALB2-201ENST00000261584 EVA1BQ9NVM1 165 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 AK6Q9Y3D8 172 aaKnown RBP9.58□□□□□ -0.88
PALB2-201ENST00000261584 LOXHD1Q8IVV2 1947 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 UNCXA6NJT0 531 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 OR52A4PA6NMU1 304 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 K7ESM1 405 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 PROM1O43490 865 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 MPZL2O60487 215 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 DNAJB5O75953 348 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 OSMP13725 252 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 DNASE1P24855 282 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 IFNGR2P38484 337 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 FBXW4P57775 412 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 IFITM2Q01629 132 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 IRF3Q14653 427 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 GXYLT1Q4G148 440 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 PRPF38BQ5VTL8 546 aaKnown RBP9.58□□□□□ -0.88
PALB2-201ENST00000261584 SLC27A4Q6P1M0 643 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 RASGEF1AQ8N9B8 481 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 TNFAIP8L1Q8WVP5 186 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 SLC7A6Q92536 515 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 ISG20Q96AZ6 181 aaKnown RBP9.58□□□□□ -0.88
PALB2-201ENST00000261584 EFHD2Q96C19 240 aaPredicted RBP9.58□□□□□ -0.88
PALB2-201ENST00000261584 MAP6Q96JE9 813 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 SAMD8Q96LT4 415 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 FOXN4Q96NZ1 517 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 QRFPRQ96P65 431 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 CACNG6Q9BXT2 260 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 SLC25A18Q9H1K4 315 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 PDFQ9HBH1 243 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 FBXL12Q9NXK8 326 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 SSC5DA1L4H1 1573 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 A0A0G2JMP0 313 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 A0A0X1KG70 313 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 LEFTY2O00292 366 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 PRKCAP17252 672 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 RHCEP18577 417 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 POU6F2P78424 691 aaPredicted RBP9.58□□□□□ -0.88
PALB2-201ENST00000261584 BTN1A1Q13410 526 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 SEC23BQ15437 767 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 SMUG1Q53HV7 270 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 AFMIDQ63HM1 303 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 VRK2Q86Y07 508 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 ZNF655Q8N720 491 aaPredicted RBP9.58□□□□□ -0.88
PALB2-201ENST00000261584 OR4M2Q8NGB6 313 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 OR52N2Q8NGI0 321 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 SUSD6Q92537 303 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 MCHR1Q99705 422 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 HMX1Q9NP08 348 aaPredicted RBP9.58□□□□□ -0.88
PALB2-201ENST00000261584 TEX10Q9NXF1 929 aaPredicted RBP9.58□□□□□ -0.88
PALB2-201ENST00000261584 DPP7Q9UHL4 492 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 BTNL2Q9UIR0 455 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 TMPRSS11EQ9UL52 423 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 SH2B3Q9UQQ2 575 aa9.58□□□□□ -0.88
PALB2-201ENST00000261584 MANSC4A6NHS7 340 aaPredicted RBP9.57□□□□□ -0.88
PALB2-201ENST00000261584 GRXCR1A8MXD5 290 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 DOK2O60496 412 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 APOC3P02656 99 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 UCHL1P09936 223 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 C1GALT1C1LP0DN25 315 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 CXCR2P25025 360 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 PSMB10P40306 273 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 METAP1P53582 386 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 HCCSP53701 268 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 SEC13P55735 322 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 SMIM11AP58511 58 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 ACVR1Q04771 509 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 TEAD2Q15562 447 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 HES5Q5TA89 166 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 CD300LGQ6UXG3 332 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 UBQLNLQ8IYU4 475 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 FTMTQ8N4E7 242 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 KLHL36Q8N4N3 616 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 ANKK1Q8NFD2 765 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 C1orf216Q8TAB5 229 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 GLYATL1Q969I3 302 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 TCEAL4Q96EI5 215 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 TRMT61AQ96FX7 289 aaKnown RBP9.57□□□□□ -0.88
PALB2-201ENST00000261584 MRPL9Q9BYD2 267 aaKnown RBP9.57□□□□□ -0.88
PALB2-201ENST00000261584 DPH1Q9BZG8 443 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 FZD3Q9NPG1 666 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 ACER3Q9NUN7 267 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 FNIP2Q9P278 1114 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 RPS6KB2Q9UBS0 482 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 RASD1Q9Y272 281 aa9.57□□□□□ -0.88
PALB2-201ENST00000261584 MRPS23Q9Y3D9 190 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms