RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 KIAA0319Q5VV43 1072 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 PLBD1Q6P4A8 553 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 KLHDC8AQ8IYD2 350 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 TMEM40Q8WWA1 233 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 ZNF559Q9BR84 538 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 TP63Q9H3D4 680 aaPredicted RBP11.53□□□□□ -0.56
COL8A1-201ENST00000261037 FAM189A1O60320 539 aa11.52□□□□□ -0.56
COL8A1-201ENST00000261037 BRINP1O60477 761 aa11.52□□□□□ -0.56
COL8A1-201ENST00000261037 RBBP9O75884 186 aa11.52□□□□□ -0.56
COL8A1-201ENST00000261037 HNRNPA1P09651 372 aaKnown RBP eCLIP11.52□□□□□ -0.56
COL8A1-201ENST00000261037 HOXD8P13378 290 aaPredicted RBP11.52□□□□□ -0.56
COL8A1-201ENST00000261037 NR4A2P43354 598 aa11.52□□□□□ -0.56
COL8A1-201ENST00000261037 WNT7BP56706 349 aa11.52□□□□□ -0.56
COL8A1-201ENST00000261037 BCL2L15Q5TBC7 163 aa11.52□□□□□ -0.56
COL8A1-201ENST00000261037 OR52E8Q6IFG1 317 aa11.52□□□□□ -0.56
COL8A1-201ENST00000261037 MTFR2Q6P444 385 aa11.52□□□□□ -0.56
COL8A1-201ENST00000261037 FIGLAQ6QHK4 219 aa11.52□□□□□ -0.56
COL8A1-201ENST00000261037 MEX3DQ86XN8 651 aaKnown RBP11.52□□□□□ -0.56
COL8A1-201ENST00000261037 Q8N402 240 aa11.52□□□□□ -0.56
COL8A1-201ENST00000261037 CWH43Q9H720 699 aa11.52□□□□□ -0.56
COL8A1-201ENST00000261037 OR2S2Q9NQN1 319 aa11.52□□□□□ -0.56
COL8A1-201ENST00000261037 CCM2LQ9NUG4 571 aaPredicted RBP11.52□□□□□ -0.56
COL8A1-201ENST00000261037 FAM118AQ9NWS6 357 aa11.52□□□□□ -0.56
COL8A1-201ENST00000261037 ICKQ9UPZ9 632 aa11.52□□□□□ -0.56
COL8A1-201ENST00000261037 OTOL1A6NHN0 477 aaPredicted RBP11.52□□□□□ -0.57
COL8A1-201ENST00000261037 H7C417 338 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 YY2O15391 372 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 RAD1O60671 282 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 PPP1R3DO95685 299 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 CERS1P27544 350 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 NSDHLQ15738 373 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 NECAB3Q96P71 396 aaPredicted RBP11.52□□□□□ -0.57
COL8A1-201ENST00000261037 NAA11Q9BSU3 229 aaPredicted RBP11.52□□□□□ -0.57
COL8A1-201ENST00000261037 ZNF442Q9H7R0 627 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 RHCEP18577 417 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 SPINT3P49223 89 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 LBX1P52954 281 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 SH3BP2P78314 561 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 FADDQ13158 208 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 ELAVL3Q14576 367 aaKnown RBP11.52□□□□□ -0.57
COL8A1-201ENST00000261037 HYAL4Q2M3T9 481 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 EEF1A1P5Q5VTE0 462 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 EIF5AL1Q6IS14 154 aaKnown RBP11.52□□□□□ -0.57
COL8A1-201ENST00000261037 ZNF551Q7Z340 670 aaPredicted RBP11.52□□□□□ -0.57
COL8A1-201ENST00000261037 GPR137CQ8N3F9 429 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 TRMT10AQ8TBZ6 339 aaKnown RBP11.52□□□□□ -0.57
COL8A1-201ENST00000261037 TMEM19Q96HH6 336 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 EBF1Q9UH73 591 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 H0YAE9 185 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 GABBR2O75899 941 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 GKN3PP0CG01 181 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 ZNF865P0CJ78 1059 aaPredicted RBP11.52□□□□□ -0.57
COL8A1-201ENST00000261037 HSD11B2P80365 405 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 C6orf141Q5SZD1 244 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 LRRN1Q6UXK5 716 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 CFAP77Q6ZQR2 320 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 DCDC5Q6ZRR9 648 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 OR5AR1Q8NGP9 310 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 SORBS1Q9BX66 1292 aaKnown RBP11.52□□□□□ -0.57
COL8A1-201ENST00000261037 IGSF5Q9NSI5 407 aa11.52□□□□□ -0.57
COL8A1-201ENST00000261037 GGT3PA6NGU5 568 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 ZNF888P0CJ79 500 aaPredicted RBP11.51□□□□□ -0.57
COL8A1-201ENST00000261037 THEGLP0DJG4 465 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 KDELR2P33947 212 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 HTR6P50406 440 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 SPRYD4Q8WW59 207 aaPredicted RBP11.51□□□□□ -0.57
COL8A1-201ENST00000261037 SLC41A3Q96GZ6 507 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 PHOX2BQ99453 314 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 MGAT4CQ9UBM8 478 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 SORBS2O94875 1100 aaKnown RBP11.51□□□□□ -0.57
COL8A1-201ENST00000261037 NDUFV2P19404 249 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 SLC2A5P22732 501 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 RORAP35398 523 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 ACTC1P68032 377 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 ACTA1P68133 377 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 MALLQ13021 153 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 CEACAM7Q14002 265 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 C1orf220Q5T0J3 134 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 FAM205BPQ63HN1 556 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 TOR1AIP2Q8NFQ8 470 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 OR14L1PQ8NHC6 308 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 NETO1Q8TDF5 533 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 LRIG1Q96JA1 1093 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 MACROD1Q9BQ69 325 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 SLC17A9Q9BYT1 436 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 RARRES3Q9UL19 164 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 RPH3AQ9Y2J0 694 aaPredicted RBP11.51□□□□□ -0.57
COL8A1-201ENST00000261037 SH3PXD2BA1X283 911 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 VSTM2BA6NLU5 285 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 NOTOA8MTQ0 251 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 SEMA4FO95754 770 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 LAMP1P11279 417 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 ARSAP15289 507 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 HRH2P25021 359 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 PTGER1P34995 402 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 ERVPABLB-1P60509 514 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 NPRL3Q12980 569 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 ZNF791Q3KP31 576 aaPredicted RBP11.51□□□□□ -0.57
COL8A1-201ENST00000261037 HES5Q5TA89 166 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 BLOC1S3Q6QNY0 202 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms